Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 AC103710.2-202ENST00000641454 2853 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 BDP1P-201ENST00000582658 1990 ntBASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HCFC2Q9Y5Z7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RNA5SP391-201ENST00000363456 119 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 Y_RNA.158-201ENST00000363651 101 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 SNORD82-201ENST00000365530 70 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RNA5SP187-201ENST00000384400 119 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 MIR568-201ENST00000385036 95 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AL121834.1-202ENST00000404494 277 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 Y_RNA.605-201ENST00000410577 105 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-387P-201ENST00000411331 105 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RPL31P2-201ENST00000413849 377 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AC068533.1-201ENST00000418542 415 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RPL23AP52-201ENST00000439311 478 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 HMGB3P11-201ENST00000440127 604 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 MTND1P17-201ENST00000448961 204 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 snoU13.7-201ENST00000459220 104 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 FTH1P24-201ENST00000503502 462 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 CCDC34P1-201ENST00000507441 517 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RPS27AP18-201ENST00000515536 459 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RN7SKP24-201ENST00000515888 284 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-1137P-201ENST00000517073 99 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 COX6CP5-201ENST00000527162 228 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AL008729.2-201ENST00000606393 473 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AC022893.3-201ENST00000607665 437 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AL157817.1-201ENST00000614264 790 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 MIR6891-201ENST00000618788 93 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AC022418.1-201ENST00000624118 445 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 U6.114-201ENST00000636407 96 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 AC008013.2-202ENST00000637965 364 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 Z95327.2-201ENST00000414579 1873 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 Z95331.1-201ENST00000623075 23112 ntBASIC4.68□□□□□ -1.66
HCFC2Q9Y5Z7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AC073136.1-201ENST00000449426 2884 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 Y_RNA.148-201ENST00000363557 117 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-593P-201ENST00000364716 112 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 MIR3065-201ENST00000390137 79 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-308P-201ENST00000390957 107 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 RNA5SP171-201ENST00000391071 115 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 EIF4E2P1-201ENST00000393781 255 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL136372.1-201ENST00000403060 228 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 RNU4-46P-201ENST00000410818 138 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 Y_RNA.618-201ENST00000410949 107 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 BX323014.1-201ENST00000412876 237 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AC009310.1-201ENST00000414414 451 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 SKA2P1-201ENST00000425592 390 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL731563.1-201ENST00000442202 214 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL035666.1-201ENST00000446195 348 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL031584.1-201ENST00000447169 754 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AC012671.1-201ENST00000451912 203 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 BTF3P15-201ENST00000455606 336 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL132838.2-201ENST00000492041 314 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AP002812.1-201ENST00000495378 474 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AC008958.1-201ENST00000511047 682 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 RFPL4AP5-201ENST00000514977 504 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 SNORA67.7-201ENST00000516664 135 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 RNU6-256P-201ENST00000516747 97 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 RN7SKP295-201ENST00000517264 153 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 HMGB1P19-201ENST00000517578 577 ntBASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.67□□□□□ -1.66
HCFC2Q9Y5Z7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms