Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC010733.2-201ENST00000589496 5702 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AF117829.1-206ENST00000621883 3802 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 AC002546.1-201ENST00000588041 2504 ntBASIC4.6□□□□□ -1.67
COL4A3BPQ9Y5P4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AC106871.1-201ENST00000568324 3102 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-181P-201ENST00000363225 107 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-960P-201ENST00000364056 120 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR558-201ENST00000384920 94 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AL121834.1-202ENST00000404494 277 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AL160275.2-201ENST00000412010 394 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AC073464.1-201ENST00000429823 534 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 RPL36AP6-201ENST00000435770 321 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AL132838.2-201ENST00000492041 314 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 RPL37P25-201ENST00000507308 276 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-445P-201ENST00000516949 107 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 RN7SKP258-201ENST00000517151 304 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 MYL12AP1-201ENST00000518490 515 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 HMGB1P41-201ENST00000520234 440 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 ATP5F1P5-201ENST00000526403 760 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 OR8R1P-201ENST00000543943 764 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR7151-201ENST00000617477 60 ntBASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
COL4A3BPQ9Y5P4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
COL4A3BPQ9Y5P4 AC087190.4-201ENST00000574616 8334 ntBASIC4.59□□□□□ -1.68
COL4A3BPQ9Y5P4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
COL4A3BPQ9Y5P4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.59□□□□□ -1.68
COL4A3BPQ9Y5P4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 OR5J1P-201ENST00000313544 939 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 MIR448-201ENST00000362131 111 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 RPL21P65-201ENST00000406094 466 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 ZNF90P2-204ENST00000419323 1075 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC104651.1-201ENST00000427559 735 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL117339.2-201ENST00000430475 180 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 SNORA71B-202ENST00000439232 272 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 DNAJC19P4-201ENST00000440115 345 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC006011.1-201ENST00000442758 349 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 FABP3P2-201ENST00000453169 399 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 CEACAMP4-201ENST00000457676 421 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC007182.2-201ENST00000489251 402 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 HMGB3P15-201ENST00000507326 574 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC093824.1-201ENST00000508796 343 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC026402.1-201ENST00000513642 170 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC090572.1-201ENST00000519251 160 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC098848.2-201ENST00000588023 330 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC068790.6-201ENST00000602558 258 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL020997.2-201ENST00000602607 184 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AL136363.1-201ENST00000605349 337 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 AC099654.12-201ENST00000639868 649 ntBASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A3BPQ9Y5P4 RLIMP1-201ENST00000339626 1680 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 SNORD74.4-201ENST00000364129 80 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RNA5SP513-201ENST00000364648 118 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RN7SKP226-201ENST00000364912 300 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms