Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC005921.1-201ENST00000510589 286 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 MIR4504-201ENST00000577413 92 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC006130.2-201ENST00000586202 326 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 MIR7702-201ENST00000621931 59 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 YWHAEP7-203ENST00000622054 312 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AC112487.2-201ENST00000637950 304 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 AL133383.2-201ENST00000622958 2336 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 FAM91A3P-201ENST00000456826 2544 ntBASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTDP1Q9Y5B0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 NUP58P1-201ENST00000502546 1738 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 FRG1BP-201ENST00000278882 761 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC067945.1-201ENST00000342609 618 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL161781.1-201ENST00000354277 403 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 RNU1-108P-201ENST00000362556 161 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 RNU4-73P-201ENST00000363164 141 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 RNY3P3-201ENST00000363816 102 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 RNU1-39P-201ENST00000383897 165 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL024474.1-201ENST00000404655 591 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 MIR1183-201ENST00000408856 89 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 RN7SKP159-201ENST00000410657 292 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 CYCSP19-201ENST00000411715 316 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 MTATP6P18-201ENST00000417994 673 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 SDCBPP3-201ENST00000419629 891 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 OR4F13P-201ENST00000428478 931 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 SEPT14P3-201ENST00000439401 183 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL732372.2-207ENST00000445840 183 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 SEPT14P2-201ENST00000453405 183 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC005008.1-201ENST00000456151 612 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC087879.1-201ENST00000474343 374 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC005726.1-201ENST00000494679 427 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AP001086.1-201ENST00000494882 321 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC010587.1-201ENST00000505809 469 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 SEPT14P4-201ENST00000513445 186 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 Y_RNA.675-201ENST00000516389 149 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 FO082796.1-201ENST00000523795 183 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC034105.3-201ENST00000565294 442 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 RPL23AP87-202ENST00000573039 466 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 MIR5684-201ENST00000585074 65 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL353997.4-201ENST00000586196 166 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC078795.3-201ENST00000602913 472 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL136363.1-201ENST00000605349 337 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC006504.8-201ENST00000621046 635 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 ZNF680P1-201ENST00000436625 1469 ntBASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTDP1Q9Y5B0 AC016588.2-201ENST00000632484 3021 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 RNU6-28P-201ENST00000362378 107 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 SNORA31-201ENST00000362607 130 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 Y_RNA.142-201ENST00000363491 102 ntBASIC4.72□□□□□ -1.65
CTDP1Q9Y5B0 SNORA20.2-201ENST00000383922 131 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms