Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AL157392.4-201ENST00000609756 345 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AL162274.2-201ENST00000614406 332 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC104985.3-201ENST00000623479 597 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 OR1S1-201ENST00000624470 978 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 RNU4-51P-201ENST00000364206 140 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 RNU6-925P-201ENST00000384629 104 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC007435.1-201ENST00000421086 415 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 NDUFB4P6-201ENST00000436819 366 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 ST13P20-201ENST00000447996 1065 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC090525.1-201ENST00000479116 478 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC087808.1-201ENST00000520501 361 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 LARP7P2-201ENST00000575306 125 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC144521.1-201ENST00000607148 956 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC123767.1-202ENST00000620407 817 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AL445984.1-201ENST00000637834 659 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.16□□□□□ -1.9
SMC3Q9UQE7 AC087359.1-201ENST00000508335 1740 ntBASIC3.16□□□□□ -1.9
SMC3Q9UQE7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.15□□□□□ -1.9
SMC3Q9UQE7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.9
SMC3Q9UQE7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SMC3Q9UQE7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 RNU6-878P-201ENST00000384578 110 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 OR4K6P-201ENST00000416478 897 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 RPL27AP8-201ENST00000424277 446 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 MTCYBP11-201ENST00000447254 1109 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC104978.1-201ENST00000449387 391 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 USP9YP34-201ENST00000453983 808 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 OR4G11P-201ENST00000492842 939 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 MTCYBP16-201ENST00000509187 1129 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC125611.1-201ENST00000549563 229 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 MIR4446-201ENST00000578505 67 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC015688.2-201ENST00000584523 262 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 BNIP3P24-201ENST00000593398 557 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC024220.1-201ENST00000603675 484 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AL391262.2-201ENST00000622466 494 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC068880.5-201ENST00000624331 290 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC099654.9-201ENST00000637055 678 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC107982.1-201ENST00000507171 1300 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC135776.4-201ENST00000624300 1904 ntBASIC3.15□□□□□ -1.91
SMC3Q9UQE7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.15□□□□□ -1.91
SMC3Q9UQE7 AC009812.4-201ENST00000569134 1805 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 RNU6-216P-201ENST00000363282 104 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 snoZ40.1-201ENST00000364540 72 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 UBA52P6-201ENST00000399822 382 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AL138827.1-201ENST00000402666 306 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AL592148.1-201ENST00000413568 445 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 Z75741.2-201ENST00000417272 1167 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 PSMA6P3-201ENST00000428242 164 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC004854.1-201ENST00000440356 349 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC119751.4-201ENST00000507498 357 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC008716.1-201ENST00000511084 513 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AP000867.2-201ENST00000532468 320 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC022080.3-201ENST00000544433 482 ntBASIC3.14□□□□□ -1.91
SMC3Q9UQE7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC3Q9UQE7 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms