Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 Y_RNA.719-201ENST00000517156 106 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 MIR4472-2-201ENST00000582069 67 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC011494.1-201ENST00000596454 237 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC123786.2-201ENST00000603459 275 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AL138889.2-201ENST00000603883 242 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC018445.2-201ENST00000622987 260 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC091812.1-201ENST00000432235 1948 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 STX3-208ENST00000641815 3236 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL672167.1-204ENST00000641875 3017 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 XIAPP3-201ENST00000312918 795 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 RNU6-266P-201ENST00000364225 107 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 EIF4EP1-201ENST00000422311 642 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 MTND2P29-201ENST00000438595 412 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC010655.1-201ENST00000449336 292 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC112492.4-201ENST00000456549 352 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC026801.1-201ENST00000497178 464 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 MTCO3P44-201ENST00000510977 541 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 RNA5SP249-201ENST00000516127 99 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 RNU4-77P-201ENST00000516692 156 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 CYCSP40-201ENST00000575927 294 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL670379.6-201ENST00000603753 252 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL355297.3-201ENST00000604082 446 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC008162.1-201ENST00000604718 254 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL670379.1-201ENST00000604752 252 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL670379.5-201ENST00000605253 252 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL670379.8-201ENST00000605353 252 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL670379.7-201ENST00000605823 252 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 SNORD58B-201ENST00000607313 66 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AL022401.1-201ENST00000619498 108 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC091905.4-201ENST00000623432 202 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC067931.1-201ENST00000624190 671 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC104118.1-201ENST00000607625 1589 ntBASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
AP4E1Q9UPM8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RNU6-874P-201ENST00000362390 105 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RN7SKP104-201ENST00000362605 328 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RHOT1P2-201ENST00000366423 333 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 Y_RNA.447-201ENST00000384184 113 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 Y_RNA.493-201ENST00000384422 102 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RNU6-393P-201ENST00000384475 107 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RNU6-306P-201ENST00000384617 107 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RNU6-101P-201ENST00000410323 104 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AC011933.1-201ENST00000413334 321 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RPL21P24-201ENST00000413752 448 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 Z99755.1-201ENST00000414048 380 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 CEACAMP1-201ENST00000434624 1035 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 MTCO3P45-201ENST00000443036 613 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 NOTCH2P1-201ENST00000443481 624 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AC007967.1-201ENST00000455422 1159 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RPL23AP56-201ENST00000460778 453 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 RPS3AP41-201ENST00000462701 778 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 SLC25A15P5-201ENST00000508033 253 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AL671862.1-201ENST00000515851 349 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AP001922.4-201ENST00000526967 290 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AC091516.1-201ENST00000549191 703 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AL049839.1-201ENST00000556151 657 ntBASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
AP4E1Q9UPM8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms