Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 ZNF734P-201ENST00000419494 1534 ntBASIC1.92□□□□□ -2.1
CCDC88CQ9P219 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC88CQ9P219 MTND5P31-201ENST00000419366 1374 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 RNU6-1226P-201ENST00000384317 107 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 SNORA51.12-201ENST00000384448 134 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 MIR525-201ENST00000384978 85 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 RNU6-1077P-201ENST00000410506 102 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AL133384.1-201ENST00000412744 351 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 HMGB3P31-201ENST00000413333 595 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 MTCO3P30-201ENST00000426425 670 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC003989.2-201ENST00000440224 169 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 IFNA11P-201ENST00000446352 526 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 MTND5P8-201ENST00000449817 1083 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC079804.2-201ENST00000490376 200 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 SNORA48.9-201ENST00000516419 162 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AL110115.1-201ENST00000614396 364 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC095031.1-201ENST00000623685 672 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 RNU6-1027P-201ENST00000383998 107 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AL590762.3-201ENST00000436372 640 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC092798.1-201ENST00000458542 409 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC016065.2-201ENST00000514530 444 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC074051.3-201ENST00000570238 358 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 AC098826.3-201ENST00000603823 466 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 DPRXP5-201ENST00000604662 539 ntBASIC1.91□□□□□ -2.1
CCDC88CQ9P219 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC88CQ9P219 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.9□□□□□ -2.1
CCDC88CQ9P219 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
CCDC88CQ9P219 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.1
CCDC88CQ9P219 AC009487.4-201ENST00000624969 3585 ntBASIC1.9□□□□□ -2.1
CCDC88CQ9P219 TAS2R15P-201ENST00000390674 928 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 RNU6-77P-201ENST00000410554 91 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC010385.1-201ENST00000412374 256 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 Z75741.2-201ENST00000417272 1167 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC008173.1-201ENST00000418901 264 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 HMGN2P30-201ENST00000423237 256 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 TMEM167AP1-201ENST00000423409 219 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AL445646.1-201ENST00000431784 216 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 MTCYBP34-201ENST00000439552 670 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 OR11H5P-201ENST00000554039 926 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AL133507.1-201ENST00000605269 557 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AL390240.1-201ENST00000612950 384 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AL356118.1-201ENST00000635272 1078 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC002543.1-201ENST00000299783 1954 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC091564.4-201ENST00000533934 2194 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 MIRLET7G-201ENST00000362280 84 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 RNA5SP27-201ENST00000363839 119 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 RNU6-76P-201ENST00000384060 104 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 ATP5F1P6-201ENST00000402768 767 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AL136372.1-201ENST00000403060 228 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 MORF4L1P7-201ENST00000426038 703 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 WARS2P1-201ENST00000429678 537 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 RPL7P52-201ENST00000449200 742 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC087879.1-201ENST00000474343 374 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 NAMPTP2-201ENST00000505629 1115 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC022784.5-201ENST00000522241 437 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC083923.1-201ENST00000523708 376 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 LRRC37A5P-203ENST00000580181 585 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC88CQ9P219 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
CCDC88CQ9P219 AC010738.1-201ENST00000604970 987 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms