Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 HMGN2P16-201ENST00000456802 261 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 MTCO3P7-201ENST00000510008 774 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL359273.1-201ENST00000510918 627 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC105914.1-201ENST00000511798 226 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC010342.1-201ENST00000514047 877 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AP001804.3-201ENST00000525146 880 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC055876.1-202ENST00000567053 138 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 MIR4528-201ENST00000577763 90 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC087499.8-201ENST00000578406 226 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AP001029.3-201ENST00000588063 596 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 DUXAP4-201ENST00000603046 613 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC090578.1-201ENST00000604955 591 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC098614.4-201ENST00000607601 462 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC005344.1-201ENST00000613391 459 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC100793.4-201ENST00000613683 429 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL133173.2-201ENST00000614270 90 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC009509.4-201ENST00000619202 509 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 AL133383.2-201ENST00000622958 2336 ntBASIC3.64□□□□□ -1.83
HCN3Q9P1Z3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 OR1S2-201ENST00000302592 978 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 U8.3-201ENST00000363321 132 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AL359837.1-201ENST00000381357 287 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 U1.1-201ENST00000384101 164 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 MIR554-201ENST00000384874 96 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AL590704.1-201ENST00000402856 794 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 RN7SKP156-201ENST00000410308 342 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 RNU6-248P-201ENST00000410720 107 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AL663109.1-201ENST00000411498 844 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC007899.1-201ENST00000412776 775 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC018630.2-202ENST00000422992 927 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AL445584.1-201ENST00000431451 330 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 ARPC3P1-201ENST00000437218 533 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 GAPDHP17-201ENST00000449858 1001 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 KLF3P2-201ENST00000465138 268 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC068305.1-201ENST00000497406 726 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 SCARNA14-201ENST00000516903 136 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC023632.4-201ENST00000517783 191 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AP002963.1-201ENST00000530590 184 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 SYF2P1-201ENST00000550658 413 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC012213.3-201ENST00000577199 777 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 MIR3913-1-201ENST00000577744 102 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 MTND1P15-201ENST00000579262 949 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC244505.7-201ENST00000599675 272 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AP000860.1-201ENST00000605250 559 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC091304.9-201ENST00000612091 226 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 HULC.1-201ENST00000612720 240 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 uc_338.12-201ENST00000616344 181 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC034229.5-201ENST00000624258 185 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 PISRT1-201ENST00000626175 531 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 AC068137.4-201ENST00000638485 296 ntBASIC3.63□□□□□ -1.83
HCN3Q9P1Z3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms