Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AP000873.5-201ENST00000533906 236 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC004024.1-201ENST00000549244 247 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC006362.1-201ENST00000567392 174 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 SEPT7P9-203ENST00000604116 343 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC103710.2-201ENST00000609912 942 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AL390240.1-201ENST00000612950 384 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC013476.2-201ENST00000614456 459 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 SDR42E1P2-201ENST00000614861 481 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 AC108479.2-201ENST00000617314 601 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
CHMP1AQ9HD42 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC008568.2-201ENST00000623862 2313 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 SRP72P2-201ENST00000344851 1979 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 GNG5P1-201ENST00000255500 204 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RNU6-348P-201ENST00000384386 107 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RN7SKP33-201ENST00000410942 340 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 BTF3L4P1-201ENST00000413813 468 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 ELOCP17-201ENST00000414751 326 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 HMGB3P23-201ENST00000414981 585 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RPS15AP12-201ENST00000419498 388 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 BX842559.1-201ENST00000419615 532 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 MTCO2P34-201ENST00000421994 607 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RPL31P12-201ENST00000422587 358 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC245028.1-201ENST00000423259 256 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 TRIAP1P1-201ENST00000427062 225 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RPS29P31-201ENST00000446147 164 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC016696.1-201ENST00000446949 318 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 SSXP4-201ENST00000451349 245 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 MTND1P12-201ENST00000455231 147 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC010587.1-201ENST00000505809 469 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 Y_RNA.672-201ENST00000516289 104 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 SNORA31.9-201ENST00000516429 84 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 RN7SKP209-201ENST00000516888 304 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AL355836.1-201ENST00000555951 870 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC013553.2-201ENST00000604244 589 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AL451064.1-201ENST00000607718 471 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC010678.1-201ENST00000614118 713 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 SNHG22-203ENST00000617833 660 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC006338.1-201ENST00000618453 749 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
CHMP1AQ9HD42 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 RNU5E-1-201ENST00000362477 120 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AL391417.1-201ENST00000404100 426 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AL359634.1-202ENST00000404721 284 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 RN7SKP140-201ENST00000411196 284 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AC091390.3-201ENST00000426478 338 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 USP12PX-201ENST00000432383 1057 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 NEK4P1-201ENST00000433383 879 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AC009961.2-201ENST00000435771 251 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AL353706.1-201ENST00000436728 494 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 NDUFB4P6-201ENST00000436819 366 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 MTCO2P18-201ENST00000457151 658 ntBASIC3.25□□□□□ -1.89
CHMP1AQ9HD42 snoU109.1-201ENST00000459339 135 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms