Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 SNORA70.3-201ENST00000365075 132 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 RNU6-729P-201ENST00000384399 107 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 TEX41-205ENST00000431734 529 ntTSL 4 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 NDUFB1P1-201ENST00000435191 180 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC018634.1-201ENST00000437554 401 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC009238.1-201ENST00000442165 424 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC009237.6-201ENST00000446969 424 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 RNU7-164P-201ENST00000459221 62 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC096725.1-201ENST00000514266 313 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 RNU1-117P-201ENST00000517041 158 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC107918.3-201ENST00000533272 382 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 OR5BK1P-201ENST00000550421 823 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC005519.1-201ENST00000554490 601 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.36□□□□□ -1.23
RNF39Q9H2S5 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 RNA5SP318-201ENST00000516352 92 ntBASIC7.35□□□□□ -1.23
RNF39Q9H2S5 RNU7-149P-201ENST00000516739 59 ntBASIC7.35□□□□□ -1.23
RNF39Q9H2S5 IGKV2-19-201ENST00000518132 283 ntBASIC7.35□□□□□ -1.23
RNF39Q9H2S5 HIGD1AP1-201ENST00000550979 275 ntBASIC7.35□□□□□ -1.23
RNF39Q9H2S5 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RNF39Q9H2S5 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC138915.4-201ENST00000565549 4147 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 RNU6-1138P-201ENST00000365359 106 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 SNORA64.3-201ENST00000365647 134 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 SNORD58A-201ENST00000383875 65 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 MIR208B-201ENST00000401172 77 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 RNU2-18P-201ENST00000411224 162 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 THEM7P-201ENST00000419556 672 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 LINC00328-2P-201ENST00000436585 219 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 RPL23AP14-201ENST00000468281 468 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC105137.2-201ENST00000569073 466 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC087575.1-201ENST00000585087 229 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC093732.2-201ENST00000607950 274 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 AC068213.1-201ENST00000625124 226 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms