Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL451044.1-201ENST00000604867 238 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 RNU6-87P-201ENST00000607561 108 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AC093913.1-201ENST00000614178 329 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 AC009161.2-201ENST00000624626 138 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS11Q9H270 U3.53-201ENST00000628922 216 ntBASIC4.52□□□□□ -1.69
VPS11Q9H270 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS11Q9H270 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS11Q9H270 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS11Q9H270 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS11Q9H270 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VPS11Q9H270 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS11Q9H270 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 AC011266.1-201ENST00000624119 3569 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 OR4G1P-203ENST00000641984 1631 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 AC139769.1-204ENST00000472297 1931 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC244517.1-201ENST00000606030 2086 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 NACAP2-201ENST00000318548 624 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS11Q9H270 RNU5E-1-201ENST00000362477 120 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 RNA5SP258-201ENST00000362750 119 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 RNA5SP307-201ENST00000362863 116 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 Y_RNA.197-201ENST00000364004 102 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 RNU4-20P-201ENST00000365601 151 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 RPL7P25-201ENST00000404151 721 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 RNU2-9P-201ENST00000410194 145 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 RNU6-1304P-201ENST00000411374 106 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS11Q9H270 COX6B1P1-201ENST00000415962 213 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 USP9YP7-201ENST00000436723 430 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC016831.4-201ENST00000438302 307 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS11Q9H270 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS11Q9H270 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS11Q9H270 HMGN2P21-201ENST00000447764 270 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 USP9YP32-201ENST00000452432 430 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 PPP1R2P5-201ENST00000457256 603 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 snoU13.8-201ENST00000458890 104 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 SCARNA10-201ENST00000459255 330 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS11Q9H270 AC053481.1-201ENST00000467217 306 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 VN1R17P-201ENST00000472048 1090 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS11Q9H270 RPL38P4-201ENST00000502376 214 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS11Q9H270 RNU6-1220P-201ENST00000517126 108 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS11Q9H270 HMGN2P6-201ENST00000551091 273 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 SETP7-201ENST00000552169 453 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC051619.2-201ENST00000559063 397 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC105129.1-201ENST00000560250 297 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS11Q9H270 BPIFA4P-203ENST00000603168 689 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS11Q9H270 MIR6719-201ENST00000622428 87 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 AC079597.1-201ENST00000624306 508 ntBASIC4.51□□□□□ -1.69
VPS11Q9H270 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VPS11Q9H270 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS11Q9H270 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS11Q9H270 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS11Q9H270 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 NOL8P1-201ENST00000508336 3529 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS11Q9H270 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
VPS11Q9H270 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS11Q9H270 Y_RNA.28-201ENST00000362554 111 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 RNU6-1120P-201ENST00000362988 108 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 RNU6-1249P-201ENST00000363237 111 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 RNU4-1-201ENST00000363925 141 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 Y_RNA.188-201ENST00000363952 111 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 SNORA71.2-201ENST00000364941 134 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 SNORA63.7-201ENST00000365579 123 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 RNU4-70P-201ENST00000384579 139 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AL591416.1-201ENST00000404015 867 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 RNA5SP113-201ENST00000410486 84 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 Y_RNA.618-201ENST00000410949 107 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 DUTP6-201ENST00000425573 462 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 RPS12P10-201ENST00000427031 377 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS11Q9H270 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 AL353748.1-201ENST00000440753 474 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 BNIP3P2-201ENST00000441221 577 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AL137792.2-201ENST00000443484 235 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AL353691.1-201ENST00000451332 387 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms