Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUCKS1Q9H1E3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 EIF2AP4-201ENST00000424793 1781 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 RNY3P11-201ENST00000364153 102 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 RNY1-201ENST00000364228 113 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-434P-201ENST00000384376 107 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 Y_RNA.506-201ENST00000384494 102 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 RNU1-77P-201ENST00000390868 162 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AL138885.1-201ENST00000405921 675 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AL358176.3-201ENST00000420757 454 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AL133396.1-201ENST00000432048 687 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 CYCSP12-201ENST00000437729 300 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 TMSB4XP3-201ENST00000445144 114 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AC025423.5-201ENST00000550230 219 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AC008162.1-201ENST00000604718 254 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AL670379.4-201ENST00000605279 254 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 MIR6826-201ENST00000617808 98 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 AC074101.1-201ENST00000637861 241 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUCKS1Q9H1E3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 EXOC5P1-201ENST00000510543 1969 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-214P-201ENST00000384130 107 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-1226P-201ENST00000384317 107 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 SNORA51.11-201ENST00000384442 131 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 AC009804.1-201ENST00000400949 179 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RNA5SP36-201ENST00000410197 133 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 C4BPAP2-201ENST00000428434 478 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 NEFMP1-201ENST00000443423 1006 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 AC005912.1-201ENST00000495392 255 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 HMGB1P21-201ENST00000502313 581 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RNA5SP360-201ENST00000516555 118 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 CYCSP27-201ENST00000527643 293 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 RPL23AP84-201ENST00000571193 464 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 MIR4504-201ENST00000577413 92 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 AC008814.1-201ENST00000603797 406 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 AL451044.1-201ENST00000604867 238 ntBASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.67□□□□□ -1.5
NUCKS1Q9H1E3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 RNA5SP335-201ENST00000363817 110 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 RNU4-50P-201ENST00000364361 141 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 RNU6-715P-201ENST00000365204 103 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 Y_RNA.526-201ENST00000384572 110 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 AL133388.1-201ENST00000404509 287 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 RPL21P38-201ENST00000418090 167 ntBASIC5.66□□□□□ -1.5
NUCKS1Q9H1E3 RPL23AP38-201ENST00000423801 469 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms