Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 MTCO1P39-201ENST00000426148 480 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AL593851.1-201ENST00000426171 157 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC234781.2-201ENST00000426370 994 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 MTND5P2-201ENST00000442927 1142 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AL606662.1-201ENST00000445763 553 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 ATG12P2-201ENST00000456830 416 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 snoU13.22-201ENST00000459428 104 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC093809.1-201ENST00000509155 340 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC026407.1-201ENST00000518369 204 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC103783.1-201ENST00000520506 373 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 OR7K1P-201ENST00000546439 926 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 VN1R90P-201ENST00000595717 726 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 NIFKP6-201ENST00000598115 845 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 BNIP3P23-201ENST00000599655 511 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AP000811.1-201ENST00000603803 651 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC138932.5-201ENST00000617759 563 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AL031667.3-201ENST00000620124 655 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 AC007671.2-201ENST00000637344 619 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 API5P2-201ENST00000397055 1498 ntBASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCM2Q9BSQ5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC093010.3-201ENST00000570269 15214 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 MIR208A-201ENST00000362287 71 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RNU6-433P-201ENST00000363216 104 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RNU6-853P-201ENST00000364306 107 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 Y_RNA.548-201ENST00000384656 105 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RNU6-882P-201ENST00000391025 103 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 MTCO1P17-201ENST00000411522 491 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RABEPKP1-201ENST00000440529 1026 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC108860.1-201ENST00000484521 383 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC114967.1-201ENST00000504890 259 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 LTV1P1-201ENST00000510683 1237 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 SNORA31.8-201ENST00000516327 108 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RNA5SP468-201ENST00000516782 93 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RNU6-678P-201ENST00000516832 109 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 RNU6-528P-201ENST00000516926 100 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 MTND3P12-201ENST00000559068 328 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 MIR5004-201ENST00000579078 107 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 MIR5195-201ENST00000583555 115 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC021171.1-201ENST00000603137 706 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 YPEL5P2-201ENST00000605553 359 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC097468.3-201ENST00000607956 456 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AC103710.4-201ENST00000609301 899 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 uc_338.25-201ENST00000613756 156 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 AL513185.3-201ENST00000433335 1300 ntBASIC3.14□□□□□ -1.91
CCM2Q9BSQ5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 MTND5P7-201ENST00000413558 1798 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AL672167.1-206ENST00000356293 943 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 Y_RNA.302-201ENST00000364997 102 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 SNORA70.4-201ENST00000365509 134 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 RPL5P18-201ENST00000406671 891 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 RNU2-43P-201ENST00000410306 190 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 HMGB1P11-201ENST00000413899 637 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 NDUFB4P5-201ENST00000415445 361 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 CCDC58P2-201ENST00000417131 366 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 HSPE1P1-201ENST00000421494 318 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 OR4K11P-201ENST00000431829 904 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 THAP5P1-201ENST00000439089 262 ntBASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.13□□□□□ -1.91
CCM2Q9BSQ5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms