Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN18Q99952 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN18Q99952 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.66
PTPN18Q99952 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN18Q99952 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN18Q99952 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN18Q99952 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PTPN18Q99952 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN18Q99952 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN18Q99952 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN18Q99952 MTND4P35-201ENST00000604257 1375 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 Y_RNA.144-201ENST00000363521 113 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 Y_RNA.145-201ENST00000363527 102 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 RNU6-169P-201ENST00000365336 107 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 Y_RNA.387-201ENST00000383918 102 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 MIR559-201ENST00000385188 96 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 RN7SKP167-201ENST00000411047 285 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AP000907.1-201ENST00000428428 510 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AL358472.1-201ENST00000431295 329 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 GTF2IP13-201ENST00000438487 386 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN18Q99952 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN18Q99952 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC034222.1-201ENST00000494052 532 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 HMGB3P16-201ENST00000508037 287 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 RNU6-714P-201ENST00000516963 103 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC107953.1-201ENST00000522216 297 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN18Q99952 ELOCP31-201ENST00000540463 467 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN18Q99952 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 MIR3118-1-201ENST00000581787 76 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 MIR3922-201ENST00000585192 84 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC090971.5-201ENST00000621102 293 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AC097714.1-201ENST00000511272 1647 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 MTCO1P9-201ENST00000505577 1534 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN18Q99952 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN18Q99952 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
PTPN18Q99952 AL049555.1-201ENST00000562834 1933 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN18Q99952 AL049780.3-201ENST00000624612 1583 ntBASIC4.7□□□□□ -1.66
PTPN18Q99952 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PTPN18Q99952 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 ZNF33CP-201ENST00000432492 2030 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AL161781.1-201ENST00000354277 403 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 RNU6-853P-201ENST00000364306 107 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 SNORA4.3-201ENST00000365564 137 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 Y_RNA.381-201ENST00000365666 102 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AC019155.1-201ENST00000382242 574 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN18Q99952 RNU2-15P-201ENST00000410692 191 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 RNU6-1148P-201ENST00000410992 104 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AC078974.1-201ENST00000411597 223 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.69□□□□□ -1.66
PTPN18Q99952 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN18Q99952 AL590233.1-201ENST00000430017 456 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.69□□□□□ -1.66
PTPN18Q99952 HMGB1P18-201ENST00000438801 619 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.69□□□□□ -1.66
PTPN18Q99952 RPL7P52-201ENST00000449200 742 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 FGF7P3-201ENST00000454645 303 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.69□□□□□ -1.66
PTPN18Q99952 SNORA59A-201ENST00000459326 152 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 MTCO2P29-201ENST00000465212 189 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 RPS3AP50-201ENST00000487064 803 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AC074250.1-201ENST00000511117 192 ntBASIC4.69□□□□□ -1.66
PTPN18Q99952 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.69□□□□□ -1.66
PTPN18Q99952 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.69□□□□□ -1.66
PTPN18Q99952 AC068993.1-201ENST00000546724 589 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms