Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RPAP2P1-201ENST00000603626 1168 ntBASIC2.59□□□□□ -1.99
CDX2Q99626 AC073387.2-201ENST00000604797 784 ntBASIC2.59□□□□□ -1.99
CDX2Q99626 AL158211.2-201ENST00000607282 395 ntBASIC2.59□□□□□ -1.99
CDX2Q99626 snoU13.31-201ENST00000607291 104 ntBASIC2.59□□□□□ -1.99
CDX2Q99626 AC005046.1-201ENST00000608515 625 ntBASIC2.59□□□□□ -1.99
CDX2Q99626 AC008759.3-201ENST00000613300 508 ntBASIC2.59□□□□□ -1.99
CDX2Q99626 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX2Q99626 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX2Q99626 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CDX2Q99626 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDX2Q99626 AC109315.1-201ENST00000584143 1347 ntBASIC2.59□□□□□ -2
CDX2Q99626 AP002907.1-201ENST00000606361 1430 ntBASIC2.59□□□□□ -2
CDX2Q99626 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDX2Q99626 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.58□□□□□ -2
CDX2Q99626 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 U8.13-201ENST00000390842 128 ntBASIC2.58□□□□□ -2
CDX2Q99626 FGF7P8-201ENST00000402994 292 ntBASIC2.58□□□□□ -2
CDX2Q99626 SDCBPP3-201ENST00000419629 891 ntBASIC2.58□□□□□ -2
CDX2Q99626 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 AC005345.1-201ENST00000431868 217 ntBASIC2.58□□□□□ -2
CDX2Q99626 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.58□□□□□ -2
CDX2Q99626 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.58□□□□□ -2
CDX2Q99626 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.58□□□□□ -2
CDX2Q99626 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 RNU6-885P-201ENST00000516607 104 ntBASIC2.58□□□□□ -2
CDX2Q99626 RNA5SP468-201ENST00000516782 93 ntBASIC2.58□□□□□ -2
CDX2Q99626 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.58□□□□□ -2
CDX2Q99626 AC100870.1-201ENST00000522035 505 ntBASIC2.58□□□□□ -2
CDX2Q99626 ARL2BPP5-201ENST00000523141 481 ntBASIC2.58□□□□□ -2
CDX2Q99626 OR5BN1P-201ENST00000532955 829 ntBASIC2.58□□□□□ -2
CDX2Q99626 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.58□□□□□ -2
CDX2Q99626 TMF1P1-201ENST00000576058 373 ntBASIC2.58□□□□□ -2
CDX2Q99626 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 AC010620.2-201ENST00000600135 313 ntBASIC2.58□□□□□ -2
CDX2Q99626 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 AC084824.5-201ENST00000612009 413 ntBASIC2.58□□□□□ -2
CDX2Q99626 AC006963.1-201ENST00000624003 1052 ntBASIC2.58□□□□□ -2
CDX2Q99626 AL136520.1-201ENST00000600311 1322 ntBASIC2.58□□□□□ -2
CDX2Q99626 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDX2Q99626 AC004520.1-201ENST00000608362 1413 ntBASIC2.58□□□□□ -2
CDX2Q99626 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.58□□□□□ -2
CDX2Q99626 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDX2Q99626 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CDX2Q99626 AC093831.2-201ENST00000624393 3427 ntBASIC2.57□□□□□ -2
CDX2Q99626 DBF4P1-201ENST00000412976 1892 ntBASIC2.57□□□□□ -2
CDX2Q99626 SNORA63.3-201ENST00000362682 132 ntBASIC2.57□□□□□ -2
CDX2Q99626 RNU6-115P-201ENST00000364310 107 ntBASIC2.57□□□□□ -2
CDX2Q99626 SNORA46-201ENST00000384762 135 ntBASIC2.57□□□□□ -2
CDX2Q99626 SNORA40.4-201ENST00000390971 128 ntBASIC2.57□□□□□ -2
CDX2Q99626 RNU6-837P-201ENST00000391056 108 ntBASIC2.57□□□□□ -2
CDX2Q99626 RNU6-1077P-201ENST00000410506 102 ntBASIC2.57□□□□□ -2
CDX2Q99626 SPA17P1-201ENST00000416656 452 ntBASIC2.57□□□□□ -2
CDX2Q99626 CYCSP49-201ENST00000420810 319 ntBASIC2.57□□□□□ -2
CDX2Q99626 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.57□□□□□ -2
CDX2Q99626 AC092634.2-201ENST00000428146 1010 ntBASIC2.57□□□□□ -2
CDX2Q99626 AC012497.1-201ENST00000429392 575 ntBASIC2.57□□□□□ -2
CDX2Q99626 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.57□□□□□ -2
CDX2Q99626 AC015908.1-201ENST00000478739 476 ntBASIC2.57□□□□□ -2
CDX2Q99626 VPS26AP1-201ENST00000483197 979 ntBASIC2.57□□□□□ -2
CDX2Q99626 RN7SL283P-201ENST00000489055 303 ntBASIC2.57□□□□□ -2
CDX2Q99626 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX2Q99626 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX2Q99626 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX2Q99626 AC109471.1-201ENST00000511631 612 ntBASIC2.57□□□□□ -2
CDX2Q99626 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.57□□□□□ -2
CDX2Q99626 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX2Q99626 RNU6-56P-201ENST00000516986 93 ntBASIC2.57□□□□□ -2
CDX2Q99626 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.57□□□□□ -2
CDX2Q99626 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.57□□□□□ -2
CDX2Q99626 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.57□□□□□ -2
CDX2Q99626 SNRPGP18-201ENST00000553000 214 ntBASIC2.57□□□□□ -2
CDX2Q99626 SULT1C2P1-202ENST00000562418 459 ntBASIC2.57□□□□□ -2
CDX2Q99626 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.57□□□□□ -2
CDX2Q99626 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.57□□□□□ -2
CDX2Q99626 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.57□□□□□ -2
CDX2Q99626 AC011494.1-201ENST00000596454 237 ntBASIC2.57□□□□□ -2
CDX2Q99626 AC025588.3-201ENST00000604182 274 ntBASIC2.57□□□□□ -2
CDX2Q99626 AC120053.1-201ENST00000607706 736 ntBASIC2.57□□□□□ -2
CDX2Q99626 AP005137.2-201ENST00000609238 400 ntBASIC2.57□□□□□ -2
CDX2Q99626 AC093673.2-201ENST00000609674 331 ntBASIC2.57□□□□□ -2
CDX2Q99626 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.57□□□□□ -2
CDX2Q99626 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.57□□□□□ -2
CDX2Q99626 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDX2Q99626 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX2Q99626 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDX2Q99626 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDX2Q99626 MAPK10-322ENST00000641485 4530 ntBASIC2.56□□□□□ -2
CDX2Q99626 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.56□□□□□ -2
CDX2Q99626 RNU4-65P-201ENST00000410473 140 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.56□□□□□ -2
CDX2Q99626 RAC1P8-201ENST00000427086 527 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.56□□□□□ -2
CDX2Q99626 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.56□□□□□ -2
CDX2Q99626 AL445669.2-201ENST00000454425 421 ntBASIC2.56□□□□□ -2
CDX2Q99626 MTCO3P11-201ENST00000455103 774 ntBASIC2.56□□□□□ -2
CDX2Q99626 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.56□□□□□ -2
CDX2Q99626 TRBV26-201ENST00000456572 344 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms