Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 PRELID3BP5-201ENST00000508612 460 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 SNORA70.16-201ENST00000516390 95 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 SNORA31.22-201ENST00000517204 135 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AP003461.1-201ENST00000528866 78 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC009094.1-201ENST00000564443 426 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC105224.1-201ENST00000587055 421 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AP001429.1-201ENST00000602568 530 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC012119.1-201ENST00000603184 222 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC026790.2-201ENST00000606282 430 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AL121772.2-201ENST00000614331 297 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC068831.8-201ENST00000620171 435 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 MIR6733-201ENST00000635723 61 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC244258.1-201ENST00000637553 1071 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC009902.3-201ENST00000606235 2172 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 AC104454.1-201ENST00000421341 1401 ntBASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
RPUSD4Q96CM3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RNU4-35P-201ENST00000362588 141 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RNA5SP88-201ENST00000365560 109 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RNU1-109P-201ENST00000383960 147 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RNU6-76P-201ENST00000384060 104 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 MIR218-2-201ENST00000385006 110 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AL356421.1-201ENST00000403255 413 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 SNORA11B-201ENST00000408175 129 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 MIR1290-201ENST00000408735 78 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RNA5SP274-201ENST00000410484 108 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RPL23AP39-201ENST00000415533 405 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AL096701.2-201ENST00000416920 238 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RPL36AP36-201ENST00000418616 301 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 PPP1R11P2-201ENST00000423543 382 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 ATP5JP1-201ENST00000431631 322 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC007389.2-201ENST00000434630 306 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC024082.2-201ENST00000434771 238 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 RPL23AP58-201ENST00000440453 469 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC106707.2-201ENST00000484182 374 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC104685.1-201ENST00000502445 371 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 HSPE1P23-201ENST00000509838 286 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 FAM60DP-201ENST00000524174 632 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 MTATP6P24-201ENST00000576835 677 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 VN1R90P-201ENST00000595717 726 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC008751.2-201ENST00000597885 980 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC018714.1-201ENST00000605028 208 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AL157817.1-201ENST00000614264 790 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AL450472.3-201ENST00000615578 367 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC009268.2-201ENST00000621925 457 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC103706.2-201ENST00000638080 240 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 AC009093.8-201ENST00000641769 292 ntBASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RPUSD4Q96CM3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 RNU1-70P-201ENST00000362618 164 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 RNU6-289P-201ENST00000364093 107 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 RNU6-1200P-201ENST00000384162 107 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 SNORD17-201ENST00000390930 237 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 RNU6-754P-201ENST00000391166 107 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 MIR1193-201ENST00000408109 78 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 MIR320C1-201ENST00000408566 88 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 RN7SKP202-201ENST00000410439 330 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 MTCO1P17-201ENST00000411522 491 ntBASIC2.49□□□□□ -2.01
RPUSD4Q96CM3 AC109780.2-201ENST00000413467 845 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms