Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 IFITM8P-201ENST00000522529 394 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AP005597.4-201ENST00000526762 229 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 NCAPGP2-201ENST00000557911 754 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 AP000843.1-201ENST00000624880 701 ntBASIC5.01□□□□□ -1.61
BRF1Q92994 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
BRF1Q92994 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
BRF1Q92994 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
BRF1Q92994 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
BRF1Q92994 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRF1Q92994 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
BRF1Q92994 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
BRF1Q92994 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRF1Q92994 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5□□□□□ -1.61
BRF1Q92994 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRF1Q92994 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5□□□□□ -1.61
BRF1Q92994 AL592182.3-201ENST00000642132 3304 ntBASIC5□□□□□ -1.61
BRF1Q92994 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
BRF1Q92994 AC073343.1-201ENST00000328239 651 ntBASIC5□□□□□ -1.61
BRF1Q92994 SNORA62.1-201ENST00000364287 154 ntBASIC5□□□□□ -1.61
BRF1Q92994 RNU4-66P-201ENST00000365199 138 ntBASIC5□□□□□ -1.61
BRF1Q92994 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5□□□□□ -1.61
BRF1Q92994 RNU6-339P-201ENST00000384310 107 ntBASIC5□□□□□ -1.61
BRF1Q92994 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5□□□□□ -1.61
BRF1Q92994 AC245028.1-201ENST00000423259 256 ntBASIC5□□□□□ -1.61
BRF1Q92994 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5□□□□□ -1.61
BRF1Q92994 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5□□□□□ -1.61
BRF1Q92994 RPS17P13-201ENST00000448974 407 ntBASIC5□□□□□ -1.61
BRF1Q92994 RPL23AP81-201ENST00000455252 467 ntBASIC5□□□□□ -1.61
BRF1Q92994 PPP1R2P5-201ENST00000457256 603 ntBASIC5□□□□□ -1.61
BRF1Q92994 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5□□□□□ -1.61
BRF1Q92994 AC011276.1-201ENST00000469688 323 ntBASIC5□□□□□ -1.61
BRF1Q92994 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5□□□□□ -1.61
BRF1Q92994 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5□□□□□ -1.61
BRF1Q92994 SNORD116-26-201ENST00000516006 96 ntBASIC5□□□□□ -1.61
BRF1Q92994 RNA5SP519-201ENST00000516480 119 ntBASIC5□□□□□ -1.61
BRF1Q92994 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5□□□□□ -1.61
BRF1Q92994 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5□□□□□ -1.61
BRF1Q92994 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5□□□□□ -1.61
BRF1Q92994 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5□□□□□ -1.61
BRF1Q92994 MIR5096-201ENST00000583713 70 ntBASIC5□□□□□ -1.61
BRF1Q92994 BNIP3P22-201ENST00000593399 556 ntBASIC5□□□□□ -1.61
BRF1Q92994 AL451044.1-201ENST00000604867 238 ntBASIC5□□□□□ -1.61
BRF1Q92994 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5□□□□□ -1.61
BRF1Q92994 MIR6820-201ENST00000611508 62 ntBASIC5□□□□□ -1.61
BRF1Q92994 SNX18P1Y-201ENST00000616231 511 ntBASIC5□□□□□ -1.61
BRF1Q92994 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5□□□□□ -1.61
BRF1Q92994 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
BRF1Q92994 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5□□□□□ -1.61
BRF1Q92994 NOL8P1-201ENST00000508336 3529 ntBASIC5□□□□□ -1.61
BRF1Q92994 TAB3P1-202ENST00000452645 1634 ntBASIC5□□□□□ -1.61
BRF1Q92994 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5□□□□□ -1.61
BRF1Q92994 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5□□□□□ -1.61
BRF1Q92994 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5□□□□□ -1.61
BRF1Q92994 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.99□□□□□ -1.61
BRF1Q92994 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BRF1Q92994 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BRF1Q92994 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRF1Q92994 PABPC1P7-201ENST00000413177 1513 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.99□□□□□ -1.61
BRF1Q92994 RNU1-14P-201ENST00000362759 152 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RNU6-1078P-201ENST00000364522 103 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RNU6-641P-201ENST00000384006 107 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
BRF1Q92994 AL359634.1-202ENST00000404721 284 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AL606923.1-201ENST00000406616 190 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.99□□□□□ -1.61
BRF1Q92994 RPS12P5-201ENST00000423449 371 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.99□□□□□ -1.61
BRF1Q92994 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 NIPA2P5-201ENST00000452282 464 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RNU7-180P-201ENST00000459240 63 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 MTCO1P29-201ENST00000496868 288 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RNU6-1045P-201ENST00000516321 107 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RNA5SP49-201ENST00000516450 115 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RNA5SP73-201ENST00000516744 108 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RNU6-798P-201ENST00000516912 103 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 RPL7P20-201ENST00000520308 745 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
BRF1Q92994 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.99□□□□□ -1.61
BRF1Q92994 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
BRF1Q92994 AC020661.2-201ENST00000560114 134 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.99□□□□□ -1.61
BRF1Q92994 MIR4703-201ENST00000577728 79 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.99□□□□□ -1.61
BRF1Q92994 AL022099.1-201ENST00000604551 712 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AL356218.2-201ENST00000605264 187 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.99□□□□□ -1.61
BRF1Q92994 AL133215.3-201ENST00000609801 448 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AC064801.1-201ENST00000612025 407 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AC134503.1-201ENST00000633048 54 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 MIR4496-201ENST00000635896 61 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.99□□□□□ -1.61
BRF1Q92994 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
BRF1Q92994 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.99□□□□□ -1.61
BRF1Q92994 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.99□□□□□ -1.61
BRF1Q92994 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.99□□□□□ -1.61
BRF1Q92994 AP004289.2-201ENST00000444413 1457 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms