Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPL18P10-201ENST00000425606 538 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AL606489.2-201ENST00000433886 234 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 SNRPEP8-201ENST00000442866 260 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC108043.1-201ENST00000512696 574 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 RNA5SP179-201ENST00000517284 121 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 NARSP2-201ENST00000518524 679 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC011979.2-201ENST00000527568 352 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 OR4R1P-201ENST00000529879 463 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 YPEL5P3-201ENST00000547227 352 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 CR383656.7-201ENST00000548164 174 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 CBX3P5-201ENST00000552017 521 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 MIR4458-201ENST00000578872 75 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AP001429.1-201ENST00000602568 530 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 BRDTP1-201ENST00000605735 677 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC063943.3-201ENST00000615562 356 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 YWHAEP7-203ENST00000622054 312 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AL161637.1-201ENST00000622380 412 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AC026951.1-201ENST00000559530 2459 ntBASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ATG4AQ8WYN0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 RNU6-263P-201ENST00000363811 107 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 U3.11-201ENST00000364476 212 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 MIR1-2-201ENST00000384961 85 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 RNU6-278P-201ENST00000390945 109 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 RNU6-1158P-201ENST00000391167 107 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 RNU2-9P-201ENST00000410194 145 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC092447.6-201ENST00000414578 210 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 OR1AA1P-201ENST00000419597 916 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 GTF2IP20-201ENST00000431663 360 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 MRPS18BP2-201ENST00000434310 759 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC010655.1-201ENST00000449336 292 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 RNU6-261P-201ENST00000459506 102 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL049714.1-201ENST00000466686 347 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC025465.4-201ENST00000513422 638 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 RNA5SP208-201ENST00000516156 78 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 SNORA40.12-201ENST00000516329 111 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 RNU6-835P-201ENST00000516974 104 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AF235103.2-201ENST00000525753 346 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL133271.1-201ENST00000538229 291 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC091516.1-201ENST00000549191 703 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 ADI1P3-201ENST00000549509 470 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL133153.1-201ENST00000557756 303 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC023575.1-201ENST00000580510 358 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 GLUD1P4-201ENST00000590914 418 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 BNIP3P9-201ENST00000603714 553 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AL031176.1-201ENST00000604554 466 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC115621.1-201ENST00000604653 858 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC103710.2-201ENST00000609912 942 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 MIR378J-201ENST00000611988 109 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms