Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR5708-201ENST00000579723 85 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC073387.2-201ENST00000604797 784 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AP002802.2-201ENST00000605877 235 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AP000238.1-201ENST00000608759 426 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AL136981.2-201ENST00000617319 734 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 OR1S1-201ENST00000624470 978 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 Y_RNA.116-201ENST00000363292 103 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 Y_RNA.355-201ENST00000365462 98 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AP002784.2-201ENST00000397300 549 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC004854.1-201ENST00000440356 349 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC104090.1-201ENST00000506341 1171 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC113420.1-201ENST00000507903 571 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 RNU6-416P-201ENST00000516265 103 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 CYB5AP5-201ENST00000549779 389 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 MIR4509-3-201ENST00000578671 94 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 MIR4509-2-201ENST00000583920 94 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 BNIP3P39-201ENST00000601077 554 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 AC069431.2-201ENST00000604149 1099 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 HSPE1P14-201ENST00000605812 302 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 MIR4509-1-201ENST00000618224 94 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM3Q8TF72 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 RNU5E-10P-201ENST00000363506 118 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 BTF3P8-201ENST00000414577 526 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 RPS3AP37-201ENST00000419176 745 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 RPL21P2-201ENST00000440049 481 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AC002542.1-201ENST00000440683 193 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 RFC5P1-201ENST00000454419 874 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 MTCO1P42-201ENST00000457379 726 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 snoU13.7-201ENST00000459220 104 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AC104982.1-201ENST00000478775 574 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AC098799.2-201ENST00000509466 868 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 PRELID3BP4-201ENST00000515476 571 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 OR10V3P-201ENST00000525712 725 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AP000889.2-201ENST00000532684 490 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AC018926.3-201ENST00000618841 406 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AC004520.1-201ENST00000608362 1413 ntBASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SHROOM3Q8TF72 MTND4P9-201ENST00000507819 1346 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 ZNF271P-202ENST00000465539 1970 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC000367.1-201ENST00000452711 1766 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC244517.1-201ENST00000606030 2086 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 SFR1P1-201ENST00000403720 688 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AL138785.1-201ENST00000425821 331 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AL031313.1-201ENST00000448435 256 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC245517.4-201ENST00000448601 281 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AP000873.1-201ENST00000463987 400 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 SNX5P1-201ENST00000505757 1041 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 RN7SKP82-201ENST00000516786 223 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC004217.3-201ENST00000551552 878 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC034268.2-201ENST00000571784 482 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC002487.1-201ENST00000604565 994 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC024257.5-201ENST00000612739 531 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 OR4G3P-201ENST00000633500 913 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 AC006927.4-201ENST00000639187 543 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 BX649567.1-201ENST00000642071 1134 ntBASIC2.25□□□□□ -2.05
SHROOM3Q8TF72 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms