Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 SRIP2-201ENST00000428470 166 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 RPL23AP30-201ENST00000432419 501 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC140076.1-201ENST00000449897 361 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC010469.1-201ENST00000463864 576 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC233702.1-201ENST00000482905 502 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 RN7SL323P-201ENST00000494712 295 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC093853.1-201ENST00000515689 483 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 MYL12AP1-201ENST00000518490 515 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC037471.2-201ENST00000564941 598 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 HMGB1P6-201ENST00000569046 646 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 RPL23AP92-201ENST00000603609 255 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC115621.1-201ENST00000604653 858 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC015813.4-201ENST00000610469 179 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AL391261.4-201ENST00000616012 481 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC000123.2-201ENST00000623124 461 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC079597.1-201ENST00000624306 508 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 CYP3A51P-201ENST00000633513 256 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC097714.1-201ENST00000511272 1647 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AL451142.2-201ENST00000429076 2090 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 RNU1-108P-201ENST00000362556 161 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 RNU6-1097P-201ENST00000363586 107 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 RPL7P60-201ENST00000397636 735 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AL161631.1-201ENST00000417933 486 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC068533.1-201ENST00000418542 415 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 GPR143P-201ENST00000434155 205 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 RPL12P46-201ENST00000436610 195 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 MRPL50P4-201ENST00000446432 475 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 MTND1P18-201ENST00000448191 573 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC233279.1-201ENST00000455300 423 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 RPL5P30-201ENST00000465511 891 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AL136126.1-201ENST00000473603 402 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC087879.1-201ENST00000474343 374 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC012158.1-204ENST00000483430 465 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC112206.3-201ENST00000514578 389 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 RNA5SP401-201ENST00000515920 127 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 SCARNA13-201ENST00000516672 275 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC243972.3-201ENST00000539655 198 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC068446.3-201ENST00000555285 382 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 PSMA6P4-201ENST00000603247 718 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.812-201ENST00000610788 101 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AC096577.2-201ENST00000611455 153 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.784-201ENST00000613803 101 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.787-201ENST00000616522 101 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.780-201ENST00000617336 101 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.801-201ENST00000619005 101 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 SAGE4P-201ENST00000442271 3381 ntBASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A3Q8N4M1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A3Q8N4M1 RIOK3P1-201ENST00000418778 1528 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms