Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 OR4G2P-202ENST00000641004 1759 ntBASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
DEPDC4Q8N2C3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 RN7SKP145-201ENST00000363291 303 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 RN7SKP162-201ENST00000363605 345 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 SNORA20.1-201ENST00000364790 130 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 MIR628-201ENST00000385229 95 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 SNORA69.1-201ENST00000390904 137 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AL022722.2-201ENST00000402519 180 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AL592148.1-201ENST00000413568 445 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 EI24P1-201ENST00000416584 867 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC244098.2-201ENST00000422068 99 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC099677.3-201ENST00000427081 395 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC016027.4-201ENST00000450866 277 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 OR2AQ1P-201ENST00000451972 200 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC002553.3-201ENST00000453002 341 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 PPIAP7-201ENST00000454070 489 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 LSM3P4-201ENST00000502948 309 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC007016.1-201ENST00000512110 244 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 MIR2117-201ENST00000516780 80 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-897P-201ENST00000517135 105 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AP000620.1-201ENST00000527147 504 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AL359219.2-201ENST00000555184 348 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC064801.1-201ENST00000612025 407 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 MIR1244-1-201ENST00000612829 85 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AL355810.1-201ENST00000614629 552 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 MIR6133-201ENST00000617057 108 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC243829.7-201ENST00000633081 225 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 MIR1244-3-201ENST00000635744 85 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 MIR1244-2-201ENST00000636449 85 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 MIR1244-4-202ENST00000636813 85 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 AC114947.2-201ENST00000565748 2125 ntBASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DEPDC4Q8N2C3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-37P-201ENST00000362692 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 Y_RNA.64-201ENST00000362845 102 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 SNORA51.1-201ENST00000363243 140 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-11P-201ENST00000364234 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-7-201ENST00000364784 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNA5SP223-201ENST00000365174 120 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-8-201ENST00000365467 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-25P-201ENST00000383873 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-1-201ENST00000383898 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-209P-201ENST00000384118 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-48P-201ENST00000384161 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-36P-201ENST00000384172 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-4P-201ENST00000384205 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-5P-201ENST00000384238 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-3P-201ENST00000384314 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-16P-201ENST00000384385 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-15P-201ENST00000384534 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-2-201ENST00000384627 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-29P-201ENST00000384637 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-9-201ENST00000384776 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU6-33P-201ENST00000384793 107 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 MIR1290-201ENST00000408735 78 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU2-38P-201ENST00000410856 79 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL096829.1-201ENST00000413677 457 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 PPIAP27-201ENST00000453800 265 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 ACA64.1-201ENST00000459171 127 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RNU7-169P-201ENST00000459456 61 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AC006539.1-201ENST00000481419 501 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 RPS4XP1-201ENST00000482189 787 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 AL160314.1-201ENST00000490836 438 ntBASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.37□□□□□ -1.55
DEPDC4Q8N2C3 MTND1P19-201ENST00000511780 315 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms