Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FCF1P10-201ENST00000407590 479 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 Y_RNA.608-201ENST00000410647 95 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 RN7SKP142-201ENST00000411236 328 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 RPL21P32-201ENST00000419877 477 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC006366.1-201ENST00000422002 759 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL356583.2-201ENST00000426536 280 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC017083.1-201ENST00000428093 483 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 ATP5JP1-201ENST00000431631 322 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC108059.3-201ENST00000456388 214 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 snoU109.1-201ENST00000459339 135 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 RPS3AP50-201ENST00000487064 803 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC106872.2-201ENST00000494303 480 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 IGHV3-32-201ENST00000519182 355 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC012493.2-201ENST00000595083 291 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC073544.2-201ENST00000601155 540 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC112191.3-201ENST00000604371 277 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC103710.1-201ENST00000610003 901 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC093838.1-201ENST00000613014 469 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 uc_338.32-201ENST00000615087 172 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL450472.3-201ENST00000615578 367 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AL603758.1-201ENST00000618654 241 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC019226.1-201ENST00000625666 515 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 MAPK10-373ENST00000641983 6772 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 AC092326.2-201ENST00000624772 1561 ntBASIC3.96□□□□□ -1.78
HERC6Q8IVU3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
HERC6Q8IVU3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 MRPL42P2-201ENST00000403169 426 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 RPS7P13-201ENST00000413955 498 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC016907.1-201ENST00000419483 435 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AL353777.1-201ENST00000425552 326 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC079780.1-201ENST00000428259 207 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC024082.2-201ENST00000434771 238 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 RNU6-956P-201ENST00000458868 103 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 RNU7-59P-201ENST00000459101 61 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC055855.1-201ENST00000489563 579 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 RPL23AP94-201ENST00000512518 302 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC010342.1-201ENST00000514047 877 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 RNA5SP208-201ENST00000516156 78 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 SNORA70.18-201ENST00000516696 98 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 NARSP2-201ENST00000518524 679 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC060788.1-201ENST00000521318 469 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AL133271.1-201ENST00000538229 291 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC027807.1-201ENST00000559921 996 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 UBE2L4-201ENST00000587688 464 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC007038.2-201ENST00000608095 740 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC239868.4-201ENST00000608318 671 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AP002826.1-201ENST00000608835 315 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AL158801.5-201ENST00000623123 465 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AC112204.3-201ENST00000623822 332 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 AP000553.6-201ENST00000641242 118 ntBASIC3.95□□□□□ -1.78
HERC6Q8IVU3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HERC6Q8IVU3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 DEFB108F-201ENST00000344638 222 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms