Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RC3H1Q5TC82 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AC004076.2-201ENST00000620532 3323 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.84-201ENST00000363011 104 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 RNU6-249P-201ENST00000363016 102 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.105-201ENST00000363182 111 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 RNU6-704P-201ENST00000364162 103 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AL603910.2-201ENST00000407268 136 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 RNU2-33P-201ENST00000410344 192 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AL645568.3-201ENST00000433683 316 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 RPL19P16-201ENST00000433839 588 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 PPIAP21-201ENST00000464473 501 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AL139099.1-201ENST00000497398 403 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 SNORA31.6-201ENST00000516241 130 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 RN7SKP82-201ENST00000516786 223 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 RNU7-4P-201ENST00000516961 62 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AP000859.1-201ENST00000525536 307 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 BNIP3P5-201ENST00000562290 498 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AC109446.1-201ENST00000566172 220 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 MIR4675-201ENST00000577898 77 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AC005191.1-201ENST00000603950 358 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 BX284668.6-201ENST00000606899 438 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AC010632.3-201ENST00000611377 369 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 AC134882.1-201ENST00000603738 1676 ntBASIC6.26□□□□□ -1.41
RC3H1Q5TC82 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RC3H1Q5TC82 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AL391987.6-201ENST00000305671 199 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.237-201ENST00000364439 102 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.269-201ENST00000364685 89 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 RNU6-611P-201ENST00000384276 104 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 MIR1298-201ENST00000408783 112 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 RNU6-121P-201ENST00000410525 99 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 PSMA2P3-201ENST00000429685 675 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 NUTF2P7-201ENST00000453086 375 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 RPL7P49-201ENST00000471402 708 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 RNU6-1092P-201ENST00000516955 87 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 CYCSP27-201ENST00000527643 293 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AL390123.1-201ENST00000603216 237 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AC073410.2-201ENST00000603240 332 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AL355877.2-201ENST00000603670 358 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 FAM27B-201ENST00000610601 213 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 MIR6133-201ENST00000617057 108 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AC006484.1-201ENST00000435086 1884 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AL445437.1-201ENST00000623157 3087 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 AL592148.3-201ENST00000608771 2646 ntBASIC6.25□□□□□ -1.41
RC3H1Q5TC82 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RC3H1Q5TC82 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 EIF2AP4-201ENST00000424793 1781 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.54-201ENST00000362766 105 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.83-201ENST00000363005 113 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 Y_RNA.183-201ENST00000363882 113 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 RNU6-434P-201ENST00000384376 107 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 RNA5SP397-201ENST00000391323 118 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AC004975.1-201ENST00000428733 208 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 RPL36P19-201ENST00000430744 301 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 RPL23AP31-201ENST00000456160 467 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 SNORD97-201ENST00000459187 142 ntBASIC6.24□□□□□ -1.41
RC3H1Q5TC82 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.24□□□□□ -1.41
RC3H1Q5TC82 RNU2-69P-201ENST00000516061 100 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 154.5 ms