Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNA5SP385-201ENST00000515947 110 ntBASIC3.31□□□□□ -1.88
PTCH1Q13635 RNU6-885P-201ENST00000516607 104 ntBASIC3.31□□□□□ -1.88
PTCH1Q13635 HSPE1P18-201ENST00000517602 280 ntBASIC3.31□□□□□ -1.88
PTCH1Q13635 AL109653.1-201ENST00000603091 248 ntBASIC3.31□□□□□ -1.88
PTCH1Q13635 RPL21P136-201ENST00000605378 396 ntBASIC3.31□□□□□ -1.88
PTCH1Q13635 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTCH1Q13635 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTCH1Q13635 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCH1Q13635 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTCH1Q13635 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCH1Q13635 SNORD21-201ENST00000383953 95 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 MIR1287-201ENST00000408492 90 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCH1Q13635 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCH1Q13635 RPL31P54-201ENST00000429803 370 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.3□□□□□ -1.88
PTCH1Q13635 RABEPKP1-201ENST00000440529 1026 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCH1Q13635 LINC00888-204ENST00000487386 421 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 RPL23AP49-201ENST00000492925 468 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCH1Q13635 AC091860.1-201ENST00000505723 432 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC105914.1-201ENST00000511798 226 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.3□□□□□ -1.88
PTCH1Q13635 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCH1Q13635 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.3□□□□□ -1.88
PTCH1Q13635 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC090079.2-201ENST00000575289 768 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC092474.3-201ENST00000603022 568 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 RPAP2P1-201ENST00000603626 1168 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC055876.5-201ENST00000605667 259 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AL355810.1-201ENST00000614629 552 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AL360181.4-201ENST00000621752 134 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC095031.1-201ENST00000623685 672 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 AC080188.3-201ENST00000624842 748 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PTCH1Q13635 NUP58P1-201ENST00000502546 1738 ntBASIC3.3□□□□□ -1.88
PTCH1Q13635 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PTCH1Q13635 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTCH1Q13635 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PTCH1Q13635 RNU6-1074P-201ENST00000383995 104 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 RNU6-468P-201ENST00000384003 109 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 SNORA51.6-201ENST00000384151 125 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AL133264.1-201ENST00000407157 562 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.29□□□□□ -1.88
PTCH1Q13635 AC099677.1-201ENST00000420575 175 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCH1Q13635 AL512637.2-201ENST00000431287 1256 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AC018634.1-201ENST00000437554 401 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.29□□□□□ -1.88
PTCH1Q13635 ARPC3P2-201ENST00000457786 533 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.29□□□□□ -1.88
PTCH1Q13635 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCH1Q13635 ELOCP31-201ENST00000540463 467 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.29□□□□□ -1.88
PTCH1Q13635 SNRPGP18-201ENST00000553000 214 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AL136520.1-202ENST00000555494 763 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 MTCO3P13-201ENST00000577757 781 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AP003973.1-201ENST00000604639 691 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AL110115.1-201ENST00000614396 364 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AC002076.2-201ENST00000617362 122 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AP002371.2-201ENST00000624450 503 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.29□□□□□ -1.88
PTCH1Q13635 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTCH1Q13635 WWP1P1-201ENST00000466609 2769 ntBASIC3.29□□□□□ -1.88
PTCH1Q13635 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTCH1Q13635 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PTCH1Q13635 MTCO2P17-201ENST00000424336 677 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 MTCYBP15-201ENST00000433123 1127 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCH1Q13635 SDR42E1P3-201ENST00000438345 502 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 AC108860.1-201ENST00000484521 383 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTCH1Q13635 OR4H12P-201ENST00000556269 907 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 SULT1C2P1-202ENST00000562418 459 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 AC023043.3-201ENST00000593113 385 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 AC068831.7-201ENST00000616954 363 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCH1Q13635 AL512643.1-201ENST00000635735 524 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 GDI2P1-201ENST00000429312 1336 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 CUL1P1-201ENST00000509510 2425 ntBASIC3.28□□□□□ -1.88
PTCH1Q13635 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.28□□□□□ -1.88
PTCH1Q13635 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
PTCH1Q13635 RNU6-839P-201ENST00000363347 108 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 RNU6-207P-201ENST00000384137 107 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.27□□□□□ -1.89
PTCH1Q13635 RNU6-575P-201ENST00000411326 105 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 AC109780.2-201ENST00000413467 845 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 RPL23AP36-201ENST00000413895 458 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.27□□□□□ -1.89
PTCH1Q13635 HIGD1AP11-201ENST00000438361 280 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 AL096829.2-201ENST00000446582 742 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 MTND2P19-201ENST00000449129 1012 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.27□□□□□ -1.89
PTCH1Q13635 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.27□□□□□ -1.89
PTCH1Q13635 SNORA31.8-201ENST00000516327 108 ntBASIC3.27□□□□□ -1.89
PTCH1Q13635 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms