Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RPL23AP94-201ENST00000512518 302 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC087272.1-201ENST00000523624 533 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AC087373.1-201ENST00000524920 491 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AP003049.1-201ENST00000529418 457 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
FOXF1Q12946 LSM6P2-201ENST00000552208 177 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.02□□□□□ -2.09
FOXF1Q12946 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.02□□□□□ -2.09
FOXF1Q12946 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC002487.1-201ENST00000604565 994 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AC103798.2-201ENST00000624292 632 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AC106730.3-201ENST00000624568 641 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC010149.2-201ENST00000637608 315 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 MTND5P6-201ENST00000422338 1798 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.02□□□□□ -2.09
FOXF1Q12946 AC099654.7-201ENST00000635788 2127 ntBASIC2.02□□□□□ -2.09
FOXF1Q12946 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.02□□□□□ -2.09
FOXF1Q12946 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.01□□□□□ -2.09
FOXF1Q12946 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
FOXF1Q12946 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
FOXF1Q12946 RNU6-115P-201ENST00000364310 107 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 RNU6-468P-201ENST00000384003 109 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 SNORA1.3-201ENST00000384676 136 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 ANAPC10P1-201ENST00000395991 556 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 CYCSP45-201ENST00000402289 315 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 PTGES3P2-201ENST00000407942 482 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXF1Q12946 RNU6-712P-201ENST00000410558 100 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 RNA5SP38-201ENST00000410750 119 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 RNA5SP508-201ENST00000411327 119 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXF1Q12946 AL139413.1-201ENST00000421309 217 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 WARS2P1-201ENST00000429678 537 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXF1Q12946 AL512637.2-201ENST00000431287 1256 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AL590762.3-201ENST00000436372 640 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXF1Q12946 RPL23AP16-201ENST00000441715 421 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXF1Q12946 MTCO3P2-201ENST00000457365 171 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.01□□□□□ -2.09
FOXF1Q12946 KLRA1P-201ENST00000503499 986 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AC026414.1-201ENST00000504046 698 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXF1Q12946 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXF1Q12946 MLLT10P2-201ENST00000506434 249 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXF1Q12946 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.01□□□□□ -2.09
FOXF1Q12946 IGLV3-17-201ENST00000519099 244 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AP001804.3-201ENST00000525146 880 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AP003168.1-201ENST00000530091 307 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 ZNF705CP-201ENST00000530515 889 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 SNRPGP16-201ENST00000533275 226 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AP005205.1-201ENST00000563503 508 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 SNORD53-201ENST00000579969 78 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXF1Q12946 AC245036.5-201ENST00000596330 847 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AC024560.3-201ENST00000608482 349 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AL356094.1-201ENST00000624663 1212 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 AL590396.4-201ENST00000636779 956 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 ZNF663P-202ENST00000641770 1131 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.01□□□□□ -2.09
FOXF1Q12946 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
FOXF1Q12946 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
FOXF1Q12946 ZNF720P1-201ENST00000562403 1939 ntBASIC2.01□□□□□ -2.09
FOXF1Q12946 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2□□□□□ -2.09
FOXF1Q12946 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
FOXF1Q12946 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
FOXF1Q12946 RNU6-1180P-201ENST00000364935 107 ntBASIC2□□□□□ -2.09
FOXF1Q12946 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2□□□□□ -2.09
FOXF1Q12946 RNU6-354P-201ENST00000383862 107 ntBASIC2□□□□□ -2.09
FOXF1Q12946 RNU6-610P-201ENST00000384264 107 ntBASIC2□□□□□ -2.09
FOXF1Q12946 BOLA3P4-201ENST00000418151 400 ntBASIC2□□□□□ -2.09
FOXF1Q12946 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2□□□□□ -2.09
FOXF1Q12946 DEFB130D-201ENST00000426866 237 ntBASIC2□□□□□ -2.09
FOXF1Q12946 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2□□□□□ -2.09
FOXF1Q12946 AL035407.1-201ENST00000429211 571 ntBASIC2□□□□□ -2.09
FOXF1Q12946 AC241584.1-201ENST00000438469 1241 ntBASIC2□□□□□ -2.09
FOXF1Q12946 AL096829.2-201ENST00000446582 742 ntBASIC2□□□□□ -2.09
FOXF1Q12946 AL590664.1-201ENST00000448065 339 ntBASIC2□□□□□ -2.09
FOXF1Q12946 snoU109.4-201ENST00000458953 143 ntBASIC2□□□□□ -2.09
FOXF1Q12946 RNU7-140P-201ENST00000459546 60 ntBASIC2□□□□□ -2.09
FOXF1Q12946 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2□□□□□ -2.09
FOXF1Q12946 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2□□□□□ -2.09
FOXF1Q12946 RPL30P14-201ENST00000482744 348 ntBASIC2□□□□□ -2.09
FOXF1Q12946 AC048346.1-201ENST00000510247 144 ntBASIC2□□□□□ -2.09
FOXF1Q12946 AC010625.1-201ENST00000511296 403 ntBASIC2□□□□□ -2.09
FOXF1Q12946 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2□□□□□ -2.09
FOXF1Q12946 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2□□□□□ -2.09
FOXF1Q12946 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2□□□□□ -2.09
FOXF1Q12946 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms