Protein–RNA interactions for Protein: Q09028

RBBP4, Histone-binding protein RBBP4, humanhuman

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4Q09028 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RBBP4Q09028 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
RBBP4Q09028 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.03□□□□□ -1.92
RBBP4Q09028 Y_RNA.97-201ENST00000363094 102 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 RNU6-853P-201ENST00000364306 107 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 MIR449B-201ENST00000384995 97 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 MIR670-201ENST00000390142 98 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AL354719.1-201ENST00000406535 843 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AL512649.1-201ENST00000428997 581 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.03□□□□□ -1.92
RBBP4Q09028 TRIM60P18-201ENST00000441518 828 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 OR6K1P-201ENST00000456766 971 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 RPL21P13-201ENST00000488305 481 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 RPL7P23-201ENST00000493874 747 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.03□□□□□ -1.92
RBBP4Q09028 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AC006499.5-201ENST00000505037 514 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AC111000.2-201ENST00000507775 550 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 OR5B10P-201ENST00000532869 642 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AC007834.2-201ENST00000536310 343 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 OSBPL9P5-201ENST00000542581 171 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.03□□□□□ -1.92
RBBP4Q09028 MTCO3P24-201ENST00000572729 782 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.03□□□□□ -1.92
RBBP4Q09028 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 WISP1-OT1-201ENST00000602893 642 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 MTCYBP22-201ENST00000603788 447 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AL357094.1-201ENST00000603845 844 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 VIS1.1-201ENST00000610517 203 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 TUG1_1.1-201ENST00000610654 145 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 AL356266.1-201ENST00000623311 483 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.03□□□□□ -1.92
RBBP4Q09028 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RBBP4Q09028 AL079305.1-201ENST00000623159 3008 ntBASIC3.03□□□□□ -1.92
RBBP4Q09028 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
RBBP4Q09028 AC006378.2-201ENST00000623178 2476 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AC110774.1-201ENST00000623567 2018 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RBBP4Q09028 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RBBP4Q09028 RNU6-50P-201ENST00000362356 103 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 Y_RNA.560-201ENST00000384689 102 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 MIR23B-201ENST00000384832 97 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
RBBP4Q09028 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.02□□□□□ -1.93
RBBP4Q09028 RPL21P3-201ENST00000395517 478 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RBBP4Q09028 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.02□□□□□ -1.93
RBBP4Q09028 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 RAC1P7-201ENST00000445367 377 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.02□□□□□ -1.93
RBBP4Q09028 ELOCP23-201ENST00000452014 332 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AC146507.2-201ENST00000460608 476 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 SETP11-201ENST00000473027 690 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 HMGN2P13-201ENST00000476476 274 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AC093663.1-201ENST00000497190 394 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.02□□□□□ -1.93
RBBP4Q09028 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.02□□□□□ -1.93
RBBP4Q09028 MLLT10P2-201ENST00000506434 249 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.02□□□□□ -1.93
RBBP4Q09028 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.02□□□□□ -1.93
RBBP4Q09028 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.02□□□□□ -1.93
RBBP4Q09028 MIR4429-201ENST00000580105 73 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.02□□□□□ -1.93
RBBP4Q09028 AL133393.1-201ENST00000603277 287 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AP000403.1-201ENST00000603349 851 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AC011451.2-201ENST00000604303 598 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AP001330.4-201ENST00000604350 154 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AC073657.2-201ENST00000605661 303 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 AL392048.1-201ENST00000613946 534 ntBASIC3.02□□□□□ -1.93
RBBP4Q09028 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.02□□□□□ -1.93
RBBP4Q09028 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RBBP4Q09028 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RBBP4Q09028 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
RBBP4Q09028 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RBBP4Q09028 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms