Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC022880.1-201ENST00000534017 973 ntBASIC1.33□□□□□ -2.2
RPS28P62857 GNAI2P1-201ENST00000541815 315 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
RPS28P62857 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.33□□□□□ -2.2
RPS28P62857 AC007151.1-201ENST00000572774 483 ntBASIC1.33□□□□□ -2.2
RPS28P62857 MIR3691-201ENST00000578066 90 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC1.33□□□□□ -2.2
RPS28P62857 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.33□□□□□ -2.2
RPS28P62857 CKS1BP3-201ENST00000600888 237 ntBASIC1.33□□□□□ -2.2
RPS28P62857 SEPT7P9-203ENST00000604116 343 ntBASIC1.33□□□□□ -2.2
RPS28P62857 PRELID3BP8-201ENST00000604148 295 ntBASIC1.33□□□□□ -2.2
RPS28P62857 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.33□□□□□ -2.2
RPS28P62857 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.33□□□□□ -2.2
RPS28P62857 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RPS28P62857 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RPS28P62857 MTCO1P4-201ENST00000520516 1409 ntBASIC1.32□□□□□ -2.2
RPS28P62857 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.32□□□□□ -2.2
RPS28P62857 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
RPS28P62857 RNA5SP456-201ENST00000364002 114 ntBASIC1.32□□□□□ -2.2
RPS28P62857 RNU6-115P-201ENST00000364310 107 ntBASIC1.32□□□□□ -2.2
RPS28P62857 SNORA27.3-201ENST00000364937 134 ntBASIC1.32□□□□□ -2.2
RPS28P62857 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.32□□□□□ -2.2
RPS28P62857 RNU6-140P-201ENST00000384566 108 ntBASIC1.32□□□□□ -2.2
RPS28P62857 MIR888-201ENST00000401186 77 ntBASIC1.32□□□□□ -2.2
RPS28P62857 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RPS28P62857 CNOT7P1-201ENST00000429006 852 ntBASIC1.32□□□□□ -2.2
RPS28P62857 GTF2IP7-202ENST00000436677 309 ntBASIC1.32□□□□□ -2.2
RPS28P62857 CBWD4P-201ENST00000445695 655 ntBASIC1.32□□□□□ -2.2
RPS28P62857 RPL12P25-201ENST00000455592 494 ntBASIC1.32□□□□□ -2.2
RPS28P62857 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC1.32□□□□□ -2.2
RPS28P62857 AC010326.1-201ENST00000462726 602 ntBASIC1.32□□□□□ -2.2
RPS28P62857 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.32□□□□□ -2.2
RPS28P62857 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.32□□□□□ -2.2
RPS28P62857 AC080014.1-201ENST00000496877 1201 ntBASIC1.32□□□□□ -2.2
RPS28P62857 AC093720.1-201ENST00000505681 714 ntBASIC1.32□□□□□ -2.2
RPS28P62857 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC1.32□□□□□ -2.2
RPS28P62857 AC093752.1-206ENST00000511823 336 ntBASIC1.32□□□□□ -2.2
RPS28P62857 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.32□□□□□ -2.2
RPS28P62857 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC1.32□□□□□ -2.2
RPS28P62857 CKS1BP7-201ENST00000522230 235 ntBASIC1.32□□□□□ -2.2
RPS28P62857 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.32□□□□□ -2.2
RPS28P62857 ARL2BPP5-201ENST00000523141 481 ntBASIC1.32□□□□□ -2.2
RPS28P62857 DUXAP5-201ENST00000529668 529 ntBASIC1.32□□□□□ -2.2
RPS28P62857 HIGD1AP5-201ENST00000529959 259 ntBASIC1.32□□□□□ -2.2
RPS28P62857 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
RPS28P62857 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC1.32□□□□□ -2.2
RPS28P62857 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.32□□□□□ -2.2
RPS28P62857 AL049838.1-201ENST00000563647 981 ntBASIC1.32□□□□□ -2.2
RPS28P62857 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.32□□□□□ -2.2
RPS28P62857 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.32□□□□□ -2.2
RPS28P62857 BNIP3P25-201ENST00000596023 559 ntBASIC1.32□□□□□ -2.2
RPS28P62857 AC024220.1-201ENST00000603675 484 ntBASIC1.32□□□□□ -2.2
RPS28P62857 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.32□□□□□ -2.2
RPS28P62857 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RPS28P62857 AC091953.3-201ENST00000623220 236 ntBASIC1.32□□□□□ -2.2
RPS28P62857 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.32□□□□□ -2.2
RPS28P62857 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
RPS28P62857 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.32□□□□□ -2.2
RPS28P62857 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RPS28P62857 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPS28P62857 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPS28P62857 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS28P62857 MIR383-201ENST00000362257 73 ntBASIC1.31□□□□□ -2.2
RPS28P62857 RNU6-486P-201ENST00000363116 107 ntBASIC1.31□□□□□ -2.2
RPS28P62857 ATF1P1-201ENST00000406040 927 ntBASIC1.31□□□□□ -2.2
RPS28P62857 PTGES3P2-201ENST00000407942 482 ntBASIC1.31□□□□□ -2.2
RPS28P62857 POLHP1-201ENST00000411806 470 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS28P62857 USP9YP20-201ENST00000419224 558 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AC011242.1-201ENST00000433596 1158 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS28P62857 FABP5P14-201ENST00000437273 393 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AC016696.1-201ENST00000446949 318 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS28P62857 AL133162.1-201ENST00000463228 453 ntBASIC1.31□□□□□ -2.2
RPS28P62857 BZW1P2-201ENST00000473537 826 ntBASIC1.31□□□□□ -2.2
RPS28P62857 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RPS28P62857 RPS27AP13-201ENST00000498403 237 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AC021146.2-201ENST00000504736 556 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AC011352.3-201ENST00000505162 593 ntBASIC1.31□□□□□ -2.2
RPS28P62857 COX7A2P2-201ENST00000505291 250 ntBASIC1.31□□□□□ -2.2
RPS28P62857 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPS28P62857 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS28P62857 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
RPS28P62857 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS28P62857 AC008834.1-201ENST00000511612 175 ntBASIC1.31□□□□□ -2.2
RPS28P62857 UBE2Q2P10-201ENST00000514854 900 ntBASIC1.31□□□□□ -2.2
RPS28P62857 SNORA70.18-201ENST00000516696 98 ntBASIC1.31□□□□□ -2.2
RPS28P62857 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS28P62857 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS28P62857 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.31□□□□□ -2.2
RPS28P62857 BPTFP1-201ENST00000579209 492 ntBASIC1.31□□□□□ -2.2
RPS28P62857 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPS28P62857 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC1.31□□□□□ -2.2
RPS28P62857 AP001269.3-201ENST00000588718 329 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AL391813.1-201ENST00000603098 260 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AC007349.4-201ENST00000608114 532 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS28P62857 AC022202.1-201ENST00000613515 211 ntBASIC1.31□□□□□ -2.2
RPS28P62857 AL442067.2-201ENST00000614033 363 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms