Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC034268.2-201ENST00000571784 482 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AL353997.4-201ENST00000586196 166 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK1P53667 RPL12P50-201ENST00000603116 116 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AC006023.1-201ENST00000603944 259 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AC106791.2-201ENST00000604680 391 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AL139344.1-201ENST00000605228 195 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.48□□□□□ -1.85
LIMK1P53667 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK1P53667 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.48□□□□□ -1.85
LIMK1P53667 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.48□□□□□ -1.85
LIMK1P53667 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LIMK1P53667 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIMK1P53667 RNA5SP432-201ENST00000362480 116 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 RNU6-853P-201ENST00000364306 107 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 RNA5SP126-201ENST00000365092 109 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 MIR135A2-201ENST00000384854 100 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 RN7SKP285-201ENST00000410137 318 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 TMEM167AP1-201ENST00000423409 219 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 BX119904.4-201ENST00000424402 301 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.47□□□□□ -1.85
LIMK1P53667 MTCYBP39-201ENST00000437562 491 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC004866.2-201ENST00000438285 481 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 MTND5P2-201ENST00000442927 1142 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.47□□□□□ -1.85
LIMK1P53667 MTCO1P27-201ENST00000448269 226 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 NANOGNBP1-201ENST00000448444 480 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.47□□□□□ -1.85
LIMK1P53667 AC093392.2-201ENST00000450682 337 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 DNAJC19P1-201ENST00000455312 319 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC004263.1-201ENST00000479327 332 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.47□□□□□ -1.85
LIMK1P53667 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.47□□□□□ -1.85
LIMK1P53667 HSPE1P23-201ENST00000509838 286 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.47□□□□□ -1.85
LIMK1P53667 AC017037.2-201ENST00000513850 890 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.47□□□□□ -1.85
LIMK1P53667 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.47□□□□□ -1.85
LIMK1P53667 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.47□□□□□ -1.85
LIMK1P53667 AL121766.1-201ENST00000547436 487 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.47□□□□□ -1.85
LIMK1P53667 OR4H12P-201ENST00000556269 907 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.47□□□□□ -1.85
LIMK1P53667 AC012435.1-202ENST00000568772 240 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC010653.1-201ENST00000571108 881 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AP000811.1-201ENST00000603803 651 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC106900.2-201ENST00000604994 317 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC024560.3-201ENST00000608482 349 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC103710.4-201ENST00000609301 899 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.47□□□□□ -1.85
LIMK1P53667 AL031667.3-201ENST00000620124 655 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
LIMK1P53667 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.47□□□□□ -1.85
LIMK1P53667 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LIMK1P53667 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LIMK1P53667 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
LIMK1P53667 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
LIMK1P53667 RNU6-882P-201ENST00000391025 103 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 RNU2-43P-201ENST00000410306 190 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.46□□□□□ -1.86
LIMK1P53667 UBE2V1P13-201ENST00000436983 439 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 THAP5P1-201ENST00000439089 262 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 OR6C5P-201ENST00000452388 923 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 RPS3AP43-201ENST00000479743 781 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AC106872.3-201ENST00000495104 446 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK1P53667 AC093809.1-201ENST00000509155 340 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK1P53667 AC026407.1-201ENST00000518369 204 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK1P53667 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LIMK1P53667 DUXAP6-201ENST00000553858 601 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 DNAJC8P1-201ENST00000554535 372 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK1P53667 AL158211.1-201ENST00000566763 763 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK1P53667 CKS1BP3-201ENST00000600888 237 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK1P53667 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK1P53667 OR2AS2P-201ENST00000606902 342 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AC097468.3-201ENST00000607956 456 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 MIR7106-201ENST00000612419 65 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AL138880.2-201ENST00000616214 239 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.46□□□□□ -1.86
LIMK1P53667 AC079416.3-201ENST00000624479 549 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.46□□□□□ -1.86
LIMK1P53667 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.46□□□□□ -1.86
LIMK1P53667 MFSD8-236ENST00000641509 4050 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 AL645937.1-201ENST00000641739 1652 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 Z83843.1-201ENST00000604070 3685 ntBASIC3.46□□□□□ -1.86
LIMK1P53667 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK1P53667 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK1P53667 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 FAM35CP-201ENST00000554755 2470 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK1P53667 FTLP6-201ENST00000355274 422 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms