Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.8□□□□□ -1.32
PRIM1P49642 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 SNORA69.1-201ENST00000390904 137 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 RNU11-4P-201ENST00000391149 133 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.8□□□□□ -1.32
PRIM1P49642 RPS23P10-201ENST00000416185 486 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 CEACAMP1-201ENST00000434624 1035 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 RPEP5-201ENST00000441137 268 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 RNU7-169P-201ENST00000459456 61 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.8□□□□□ -1.32
PRIM1P49642 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.8□□□□□ -1.32
PRIM1P49642 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC6.8□□□□□ -1.32
PRIM1P49642 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.8□□□□□ -1.32
PRIM1P49642 MIR6780A-201ENST00000615089 68 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 FP236240.3-201ENST00000623061 327 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 AC243829.7-201ENST00000633081 225 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 AC004656.1-201ENST00000568479 4951 ntBASIC6.8□□□□□ -1.32
PRIM1P49642 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PRIM1P49642 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.8□□□□□ -1.32
PRIM1P49642 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.79□□□□□ -1.32
PRIM1P49642 AL034549.2-201ENST00000618285 3373 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PRIM1P49642 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 AC138393.1-203ENST00000327086 343 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 RN7SKP185-201ENST00000362813 326 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 Y_RNA.65-201ENST00000362846 100 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 Y_RNA.83-201ENST00000363005 113 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 Y_RNA.237-201ENST00000364439 102 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 SNORA5.1-201ENST00000384275 131 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 RN7SKP114-201ENST00000410327 279 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 EIF4EP2-201ENST00000422816 654 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 AL160275.3-201ENST00000423876 471 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 AC112498.1-201ENST00000444401 332 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 AC073264.2-201ENST00000448886 166 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 AC009963.2-201ENST00000453431 138 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 RNU7-120P-201ENST00000459334 63 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 FTH1P24-201ENST00000503502 462 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 RN7SKP260-201ENST00000516907 149 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 IGKV2-23-201ENST00000518729 323 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.79□□□□□ -1.32
PRIM1P49642 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.79□□□□□ -1.32
PRIM1P49642 MIR6130-201ENST00000619419 109 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 MIR6758-201ENST00000620653 63 ntBASIC6.79□□□□□ -1.32
PRIM1P49642 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PRIM1P49642 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 AC009962.1-201ENST00000567327 3813 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 RNA5SP90-201ENST00000364801 99 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 RNU6-125P-201ENST00000384505 107 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 RNU6-700P-201ENST00000391043 107 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 AL591034.2-201ENST00000402839 359 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 RNU2-50P-201ENST00000410494 143 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 DNAJC19P7-201ENST00000428811 344 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.78□□□□□ -1.32
PRIM1P49642 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 EEF1A1P1-201ENST00000447052 739 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 TPT1P12-201ENST00000448968 492 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 AC090602.1-201ENST00000469695 252 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 AC010631.1-201ENST00000474150 156 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
PRIM1P49642 RNU6-255P-201ENST00000516957 105 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.78□□□□□ -1.32
PRIM1P49642 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.78□□□□□ -1.32
PRIM1P49642 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.78□□□□□ -1.32
PRIM1P49642 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.78□□□□□ -1.32
PRIM1P49642 RNU6-85P-201ENST00000605989 107 ntBASIC6.78□□□□□ -1.32
PRIM1P49642 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.78□□□□□ -1.32
PRIM1P49642 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.78□□□□□ -1.32
PRIM1P49642 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.78□□□□□ -1.32
PRIM1P49642 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PRIM1P49642 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
PRIM1P49642 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms