Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
BRCC3P46736 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCC3P46736 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRCC3P46736 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.13□□□□□ -1.91
BRCC3P46736 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.13□□□□□ -1.91
BRCC3P46736 AC005183.1-201ENST00000603687 1979 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCC3P46736 AC104454.1-201ENST00000421341 1401 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCC3P46736 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCC3P46736 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
BRCC3P46736 RNU6-1200P-201ENST00000384162 107 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BRCC3P46736 CYCSP45-201ENST00000402289 315 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 HMGB1P17-201ENST00000403495 628 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 MIR1284-201ENST00000408337 120 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.12□□□□□ -1.91
BRCC3P46736 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.12□□□□□ -1.91
BRCC3P46736 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AL593851.1-201ENST00000426171 157 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC236972.1-201ENST00000433225 199 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.12□□□□□ -1.91
BRCC3P46736 AC093156.1-201ENST00000440382 670 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AL606662.1-201ENST00000445763 553 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 EEF1E1P1-201ENST00000446998 430 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 RPL7P52-201ENST00000449200 742 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC004263.1-201ENST00000479327 332 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC114981.1-201ENST00000503897 678 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC111000.2-201ENST00000507775 550 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 RNU6-1129P-201ENST00000515964 104 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 RNA5SP356-201ENST00000515972 94 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 RNA5SP367-201ENST00000516557 118 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC105185.1-201ENST00000518705 535 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BRCC3P46736 DEFB131D-201ENST00000526803 184 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
BRCC3P46736 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
BRCC3P46736 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.12□□□□□ -1.91
BRCC3P46736 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.12□□□□□ -1.91
BRCC3P46736 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.12□□□□□ -1.91
BRCC3P46736 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.12□□□□□ -1.91
BRCC3P46736 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.12□□□□□ -1.91
BRCC3P46736 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.12□□□□□ -1.91
BRCC3P46736 AC008751.2-201ENST00000597885 980 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC009220.3-201ENST00000604318 586 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AL592221.1-201ENST00000605266 382 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC245297.2-201ENST00000610119 565 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AL136981.2-201ENST00000617319 734 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 AC097655.1-201ENST00000635075 318 ntBASIC3.12□□□□□ -1.91
BRCC3P46736 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCC3P46736 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCC3P46736 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
BRCC3P46736 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
BRCC3P46736 AL391994.1-201ENST00000254724 282 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 RAP1BP1-201ENST00000412709 553 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 RPL7P30-201ENST00000420888 709 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCC3P46736 MTCYBP34-201ENST00000439552 670 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 AL162389.1-201ENST00000449233 177 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 AC005297.2-201ENST00000450430 606 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 ANKRD26P4-201ENST00000455755 950 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCC3P46736 AC004924.1-201ENST00000480160 781 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCC3P46736 AC096751.1-202ENST00000502691 1067 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 KCTD9P5-201ENST00000504141 1170 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 VN1R104P-201ENST00000505115 1009 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 UBTFL10-201ENST00000528532 562 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AP003461.1-201ENST00000528866 78 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 SETP7-201ENST00000552169 453 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.11□□□□□ -1.91
BRCC3P46736 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.11□□□□□ -1.91
BRCC3P46736 CYCSP2-201ENST00000558168 301 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.11□□□□□ -1.91
BRCC3P46736 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.11□□□□□ -1.91
BRCC3P46736 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCC3P46736 VN1R82P-201ENST00000601481 356 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 CLIC4P2-201ENST00000601934 717 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCC3P46736 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCC3P46736 AL360181.4-201ENST00000621752 134 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 SGO1P2-201ENST00000429458 1589 ntBASIC3.11□□□□□ -1.91
BRCC3P46736 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCC3P46736 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.11□□□□□ -1.91
BRCC3P46736 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.11□□□□□ -1.91
BRCC3P46736 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BRCC3P46736 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.1□□□□□ -1.91
BRCC3P46736 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BRCC3P46736 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
BRCC3P46736 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms