Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL15A1P39059 AC006504.1-201ENST00000562493 3666 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.31□□□□□ -1.72
COL15A1P39059 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.31□□□□□ -1.72
COL15A1P39059 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL15A1P39059 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.3□□□□□ -1.72
COL15A1P39059 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.3□□□□□ -1.72
COL15A1P39059 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
COL15A1P39059 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.3□□□□□ -1.72
COL15A1P39059 ZNF734P-201ENST00000419494 1534 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RNY4P24-201ENST00000362735 96 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RNU6-853P-201ENST00000364306 107 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL15A1P39059 RNU2-66P-201ENST00000410650 161 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 ELOCP17-201ENST00000414751 326 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 MTCO3P30-201ENST00000426425 670 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RSU1P2-202ENST00000437884 485 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 AC006028.1-201ENST00000438379 402 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.3□□□□□ -1.72
COL15A1P39059 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL15A1P39059 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RPL37P6-202ENST00000464216 403 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RN7SL429P-201ENST00000479090 223 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 TMED11P-201ENST00000479478 690 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RN7SL489P-201ENST00000486185 223 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 LARP1BP2-201ENST00000486594 519 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RN7SL327P-201ENST00000488659 223 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL15A1P39059 NDUFB4P2-201ENST00000509515 391 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RN7SKP234-201ENST00000517173 224 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.3□□□□□ -1.72
COL15A1P39059 AC022878.1-201ENST00000530684 149 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 AP001094.1-201ENST00000579805 193 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.3□□□□□ -1.72
COL15A1P39059 BCRP9-201ENST00000605312 388 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 AC073657.2-201ENST00000605661 303 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 AC131902.3-201ENST00000611767 581 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 AL162274.2-201ENST00000614406 332 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 RN7SL853P-201ENST00000617250 223 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 AL603839.4-201ENST00000624658 1005 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
COL15A1P39059 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL15A1P39059 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL15A1P39059 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL15A1P39059 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
COL15A1P39059 NUP58P1-201ENST00000502546 1738 ntBASIC4.3□□□□□ -1.72
COL15A1P39059 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL15A1P39059 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL15A1P39059 AL049780.3-201ENST00000624612 1583 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 RNU6-343P-201ENST00000364709 104 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 RNU6-356P-201ENST00000384140 107 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 Y_RNA.510-201ENST00000384511 114 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL15A1P39059 AL356421.1-201ENST00000403255 413 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 MIR1250-201ENST00000408098 113 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 MIR1289-1-201ENST00000408836 144 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 RNU2-15P-201ENST00000410692 191 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 HMGB3P23-201ENST00000414981 585 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 AL445669.1-201ENST00000426743 755 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.29□□□□□ -1.72
COL15A1P39059 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 OR2B8P-201ENST00000432841 938 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC244505.5-201ENST00000443639 207 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 RPL7P52-201ENST00000449200 742 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 snoU13.8-201ENST00000458890 104 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 KLF3P2-201ENST00000465138 268 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 S100A11P2-201ENST00000467589 312 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.29□□□□□ -1.72
COL15A1P39059 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL15A1P39059 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL15A1P39059 TXNP6-201ENST00000510190 310 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 OR4R3P-201ENST00000525084 838 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC108747.1-201ENST00000609508 535 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 AC105429.2-201ENST00000610567 517 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.29□□□□□ -1.72
COL15A1P39059 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL15A1P39059 TNPO1P3-201ENST00000436471 2662 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL15A1P39059 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL15A1P39059 SAGE4P-201ENST00000442271 3381 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.29□□□□□ -1.72
COL15A1P39059 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
COL15A1P39059 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.29□□□□□ -1.72
COL15A1P39059 AC116096.1-201ENST00000566804 2314 ntBASIC4.29□□□□□ -1.72
COL15A1P39059 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL15A1P39059 RNA5SP502-201ENST00000362694 119 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms