Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AP003467.2-201ENST00000520175 319 ntBASIC3.81□□□□□ -1.8
RFC1P35251 AP003181.2-201ENST00000528941 181 ntBASIC3.81□□□□□ -1.8
RFC1P35251 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC1P35251 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC1P35251 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC1P35251 EEF1B2P4-201ENST00000551398 348 ntBASIC3.81□□□□□ -1.8
RFC1P35251 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.81□□□□□ -1.8
RFC1P35251 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC1P35251 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC1P35251 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC1P35251 AL391813.2-201ENST00000609113 322 ntBASIC3.81□□□□□ -1.8
RFC1P35251 AC091304.9-201ENST00000612091 226 ntBASIC3.81□□□□□ -1.8
RFC1P35251 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC1P35251 AC012150.2-201ENST00000621300 544 ntBASIC3.81□□□□□ -1.8
RFC1P35251 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.81□□□□□ -1.8
RFC1P35251 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC1P35251 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFC1P35251 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFC1P35251 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFC1P35251 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC1P35251 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RFC1P35251 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 AC092125.1-201ENST00000562568 1995 ntBASIC3.8□□□□□ -1.8
RFC1P35251 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 RNU6-1249P-201ENST00000363237 111 ntBASIC3.8□□□□□ -1.8
RFC1P35251 U8.3-201ENST00000363321 132 ntBASIC3.8□□□□□ -1.8
RFC1P35251 RNA5SP51-201ENST00000364750 119 ntBASIC3.8□□□□□ -1.8
RFC1P35251 RNU6-259P-201ENST00000383999 107 ntBASIC3.8□□□□□ -1.8
RFC1P35251 RNU6-517P-201ENST00000384362 110 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AP000567.1-201ENST00000406413 156 ntBASIC3.8□□□□□ -1.8
RFC1P35251 RNU6-648P-201ENST00000410190 107 ntBASIC3.8□□□□□ -1.8
RFC1P35251 RN7SKP159-201ENST00000410657 292 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AL359704.1-201ENST00000411586 781 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.8□□□□□ -1.8
RFC1P35251 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 RPL17P49-201ENST00000443728 411 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AC010655.1-201ENST00000449336 292 ntBASIC3.8□□□□□ -1.8
RFC1P35251 SRRM1P2-201ENST00000464531 1192 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.8□□□□□ -1.8
RFC1P35251 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 RNU2-46P-201ENST00000517038 113 ntBASIC3.8□□□□□ -1.8
RFC1P35251 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.8□□□□□ -1.8
RFC1P35251 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.8□□□□□ -1.8
RFC1P35251 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 AC123904.2-201ENST00000548059 300 ntBASIC3.8□□□□□ -1.8
RFC1P35251 SYF2P1-201ENST00000550658 413 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AL121603.1-201ENST00000553815 142 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 AC006077.1-201ENST00000604746 343 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AL365503.1-201ENST00000605247 905 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AC108747.1-201ENST00000609508 535 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AL355472.4-201ENST00000610233 626 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AC091834.1-201ENST00000614543 472 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.8□□□□□ -1.8
RFC1P35251 AC079597.1-201ENST00000624306 508 ntBASIC3.8□□□□□ -1.8
RFC1P35251 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 AC119674.1-207ENST00000641355 633 ntBASIC3.8□□□□□ -1.8
RFC1P35251 AL672296.1-201ENST00000427780 2158 ntBASIC3.8□□□□□ -1.8
RFC1P35251 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFC1P35251 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.8□□□□□ -1.8
RFC1P35251 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RFC1P35251 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
RFC1P35251 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.79□□□□□ -1.8
RFC1P35251 MTND5P26-201ENST00000426018 1752 ntBASIC3.79□□□□□ -1.8
RFC1P35251 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFC1P35251 PRO1804-201ENST00000623780 2050 ntBASIC3.79□□□□□ -1.8
RFC1P35251 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
RFC1P35251 RNU1-64P-201ENST00000365443 163 ntBASIC3.79□□□□□ -1.8
RFC1P35251 RNU6-359P-201ENST00000365466 108 ntBASIC3.79□□□□□ -1.8
RFC1P35251 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RFC1P35251 Y_RNA.582-201ENST00000391023 95 ntBASIC3.79□□□□□ -1.8
RFC1P35251 CCNG1P1-201ENST00000406783 885 ntBASIC3.79□□□□□ -1.8
RFC1P35251 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.79□□□□□ -1.8
RFC1P35251 CYCSP19-201ENST00000411715 316 ntBASIC3.79□□□□□ -1.8
RFC1P35251 AC092447.6-201ENST00000414578 210 ntBASIC3.79□□□□□ -1.8
RFC1P35251 UBE2V1P10-201ENST00000414685 269 ntBASIC3.79□□□□□ -1.8
RFC1P35251 ELOCP17-201ENST00000414751 326 ntBASIC3.79□□□□□ -1.8
RFC1P35251 AL159169.1-201ENST00000421119 127 ntBASIC3.79□□□□□ -1.8
RFC1P35251 AL589872.1-201ENST00000426602 288 ntBASIC3.79□□□□□ -1.8
RFC1P35251 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.79□□□□□ -1.8
RFC1P35251 MTND1P4-201ENST00000435196 415 ntBASIC3.79□□□□□ -1.8
RFC1P35251 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.79□□□□□ -1.8
RFC1P35251 NOTCH2P1-201ENST00000443481 624 ntBASIC3.79□□□□□ -1.8
RFC1P35251 Z95327.1-201ENST00000446082 482 ntBASIC3.79□□□□□ -1.8
RFC1P35251 snoU13.8-201ENST00000458890 104 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms