Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 AC104985.3-201ENST00000623479 597 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 CTSLP2-204ENST00000629029 392 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC099654.9-201ENST00000637055 678 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 AC130650.2-201ENST00000618736 2403 ntBASIC3.16□□□□□ -1.9
HOXD10P28358 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXD10P28358 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD10P28358 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXD10P28358 U3.11-201ENST00000364476 212 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 RNU6-1180P-201ENST00000364935 107 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 RNU6-339P-201ENST00000384310 107 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD10P28358 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD10P28358 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD10P28358 AC092634.6-201ENST00000418558 192 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 MTND2P9-201ENST00000422293 931 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD10P28358 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXD10P28358 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD10P28358 RPL23AP31-201ENST00000456160 467 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AC092798.1-201ENST00000458542 409 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 OR5H5P-201ENST00000503164 928 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AIG1P1-201ENST00000503376 148 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD10P28358 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXD10P28358 AP001317.1-201ENST00000531194 960 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXD10P28358 AC079089.3-201ENST00000603094 673 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AC098826.3-201ENST00000603823 466 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AL157770.1-201ENST00000623049 439 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 AC087821.2-201ENST00000637086 450 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 MFSD8-245ENST00000641743 948 ntBASIC3.15□□□□□ -1.91
HOXD10P28358 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.15□□□□□ -1.91
HOXD10P28358 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD10P28358 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HOXD10P28358 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXD10P28358 ZNF29P-201ENST00000225587 168 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 FAM133CP-201ENST00000332869 704 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 RNU6-730P-201ENST00000383954 104 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD10P28358 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD10P28358 LUZP4P1-201ENST00000415420 344 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD10P28358 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXD10P28358 HMGB3P12-201ENST00000438745 556 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD10P28358 AC108078.3-201ENST00000502633 489 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD10P28358 AP003122.3-201ENST00000526316 255 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 HPRT1P3-201ENST00000539521 576 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AC093519.1-201ENST00000566109 298 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXD10P28358 XIAPP1-201ENST00000603162 600 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AC025588.3-201ENST00000604182 274 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AL157392.4-201ENST00000609756 345 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AC009237.15-201ENST00000610252 501 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 AC073348.1-201ENST00000623002 331 ntBASIC3.14□□□□□ -1.91
HOXD10P28358 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXD10P28358 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD10P28358 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD10P28358 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD10P28358 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXD10P28358 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HOXD10P28358 RNU6-989P-201ENST00000362756 107 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 RNU5D-1-201ENST00000363299 116 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 SNORD21-201ENST00000383953 95 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 Y_RNA.472-201ENST00000384322 102 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 Y_RNA.578-201ENST00000390903 88 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AL139039.1-201ENST00000401900 692 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 SNORA3.2-201ENST00000408221 125 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 MTND4P3-201ENST00000417829 541 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 FNDC3CP-201ENST00000420795 1155 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD10P28358 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
HOXD10P28358 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD10P28358 AC241584.1-201ENST00000438469 1241 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AC004854.1-201ENST00000440356 349 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD10P28358 AC079776.3-201ENST00000450665 370 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 MTCO3P2-201ENST00000457365 171 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXD10P28358 SNORA48.10-201ENST00000516965 160 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD10P28358 RPL7P20-201ENST00000520308 745 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXD10P28358 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD10P28358 AC018630.1-201ENST00000541376 925 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AC087481.2-201ENST00000565492 330 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD10P28358 GAS5-AS1-201ENST00000602767 694 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXD10P28358 AC090116.1-201ENST00000615679 446 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AL512506.2-201ENST00000624472 458 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 AP003485.1-201ENST00000625093 753 ntBASIC3.13□□□□□ -1.91
HOXD10P28358 ZNF519P1-201ENST00000449011 1626 ntBASIC3.12□□□□□ -1.91
HOXD10P28358 HMGB1P5-201ENST00000255320 642 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms