Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40P25942 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40P25942 RNU6-434P-201ENST00000384376 107 ntBASIC4.17□□□□□ -1.74
CD40P25942 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CD40P25942 AL590704.1-201ENST00000402856 794 ntBASIC4.17□□□□□ -1.74
CD40P25942 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.17□□□□□ -1.74
CD40P25942 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40P25942 RPS17P8-201ENST00000434525 335 ntBASIC4.17□□□□□ -1.74
CD40P25942 AL162388.1-201ENST00000450912 352 ntBASIC4.17□□□□□ -1.74
CD40P25942 RPS29P33-201ENST00000456717 146 ntBASIC4.17□□□□□ -1.74
CD40P25942 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 AC008897.1-201ENST00000494006 347 ntBASIC4.17□□□□□ -1.74
CD40P25942 MTCO1P29-201ENST00000496868 288 ntBASIC4.17□□□□□ -1.74
CD40P25942 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
CD40P25942 RN7SL558P-201ENST00000497468 299 ntBASIC4.17□□□□□ -1.74
CD40P25942 SCARNA22-201ENST00000503991 125 ntBASIC4.17□□□□□ -1.74
CD40P25942 RNU6-927P-201ENST00000516199 100 ntBASIC4.17□□□□□ -1.74
CD40P25942 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 AC135001.1-201ENST00000544546 283 ntBASIC4.17□□□□□ -1.74
CD40P25942 AC090115.3-201ENST00000553218 849 ntBASIC4.17□□□□□ -1.74
CD40P25942 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40P25942 RN7SL652P-201ENST00000577769 300 ntBASIC4.17□□□□□ -1.74
CD40P25942 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.17□□□□□ -1.74
CD40P25942 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 AC034102.8-201ENST00000615146 484 ntBASIC4.17□□□□□ -1.74
CD40P25942 BX005214.3-202ENST00000619809 325 ntBASIC4.17□□□□□ -1.74
CD40P25942 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.17□□□□□ -1.74
CD40P25942 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40P25942 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD40P25942 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CD40P25942 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CD40P25942 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40P25942 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
CD40P25942 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40P25942 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.16□□□□□ -1.74
CD40P25942 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40P25942 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CD40P25942 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CD40P25942 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CD40P25942 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40P25942 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD40P25942 AC079741.1-201ENST00000321498 212 ntBASIC4.16□□□□□ -1.74
CD40P25942 SNORA7.2-201ENST00000364446 145 ntBASIC4.16□□□□□ -1.74
CD40P25942 SNORA56-201ENST00000383966 129 ntBASIC4.16□□□□□ -1.74
CD40P25942 RNU6-398P-201ENST00000384143 109 ntBASIC4.16□□□□□ -1.74
CD40P25942 AL121834.1-202ENST00000404494 277 ntBASIC4.16□□□□□ -1.74
CD40P25942 RPS4XP7-201ENST00000406274 780 ntBASIC4.16□□□□□ -1.74
CD40P25942 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40P25942 Y_RNA.625-201ENST00000411256 107 ntBASIC4.16□□□□□ -1.74
CD40P25942 RAB28P1-201ENST00000411517 641 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC007738.1-201ENST00000413892 348 ntBASIC4.16□□□□□ -1.74
CD40P25942 AL139095.3-201ENST00000419672 1203 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40P25942 FAR2P4-202ENST00000425399 584 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC091390.3-201ENST00000426478 338 ntBASIC4.16□□□□□ -1.74
CD40P25942 AL451062.2-201ENST00000427515 271 ntBASIC4.16□□□□□ -1.74
CD40P25942 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40P25942 AC016831.4-201ENST00000438302 307 ntBASIC4.16□□□□□ -1.74
CD40P25942 TXNP1-201ENST00000441872 371 ntBASIC4.16□□□□□ -1.74
CD40P25942 H2AFZP6-201ENST00000444403 394 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC245028.2-201ENST00000458673 253 ntBASIC4.16□□□□□ -1.74
CD40P25942 RNU7-167P-201ENST00000459160 62 ntBASIC4.16□□□□□ -1.74
CD40P25942 RPL7P43-201ENST00000478876 753 ntBASIC4.16□□□□□ -1.74
CD40P25942 NIP7P2-201ENST00000485801 544 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC078817.1-201ENST00000492623 435 ntBASIC4.16□□□□□ -1.74
CD40P25942 AP002812.1-201ENST00000495378 474 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC078918.1-201ENST00000498515 228 ntBASIC4.16□□□□□ -1.74
CD40P25942 TRBVA-201ENST00000498804 316 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.16□□□□□ -1.74
CD40P25942 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40P25942 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CD40P25942 RNU1-6P-201ENST00000516290 144 ntBASIC4.16□□□□□ -1.74
CD40P25942 RNU6-256P-201ENST00000516747 97 ntBASIC4.16□□□□□ -1.74
CD40P25942 RNU6-914P-201ENST00000516749 109 ntBASIC4.16□□□□□ -1.74
CD40P25942 RNU6-709P-201ENST00000517257 104 ntBASIC4.16□□□□□ -1.74
CD40P25942 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40P25942 FKBP1BP1-201ENST00000553366 325 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC093591.2-201ENST00000565254 3843 ntBASIC4.16□□□□□ -1.74
CD40P25942 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 AC127024.5-201ENST00000580085 462 ntBASIC4.16□□□□□ -1.74
CD40P25942 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40P25942 AC234771.5-201ENST00000600161 514 ntBASIC4.16□□□□□ -1.74
CD40P25942 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
CD40P25942 uc_338.18-201ENST00000615451 175 ntBASIC4.16□□□□□ -1.74
CD40P25942 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.16□□□□□ -1.74
CD40P25942 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.16□□□□□ -1.74
CD40P25942 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CD40P25942 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms