Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PF4V1P10720 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.97□□□□□ -1.77
PF4V1P10720 uc_338.34-201ENST00000617467 174 ntBASIC3.97□□□□□ -1.77
PF4V1P10720 AC024614.3-201ENST00000637860 256 ntBASIC3.97□□□□□ -1.77
PF4V1P10720 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PF4V1P10720 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.97□□□□□ -1.77
PF4V1P10720 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PF4V1P10720 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PF4V1P10720 AC007656.2-201ENST00000624902 4547 ntBASIC3.97□□□□□ -1.77
PF4V1P10720 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PF4V1P10720 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PF4V1P10720 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PF4V1P10720 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.96□□□□□ -1.77
PF4V1P10720 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
PF4V1P10720 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
PF4V1P10720 OR4G1P-203ENST00000641984 1631 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PF4V1P10720 RN7SKP104-201ENST00000362605 328 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 RNU6-217P-201ENST00000384164 104 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 SNORA70.10-201ENST00000384515 134 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PF4V1P10720 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PF4V1P10720 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PF4V1P10720 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.96□□□□□ -1.78
PF4V1P10720 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 AC012498.1-201ENST00000424037 437 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.96□□□□□ -1.78
PF4V1P10720 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.96□□□□□ -1.78
PF4V1P10720 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 H2AFZP6-201ENST00000444403 394 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AL354714.3-201ENST00000447284 493 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AL121877.1-201ENST00000453704 622 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.96□□□□□ -1.78
PF4V1P10720 RN7SL319P-201ENST00000480656 221 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 RPL32P34-201ENST00000486380 400 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC116353.2-201ENST00000505332 712 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 LRRC34P2-201ENST00000514850 553 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 RNU6-358P-201ENST00000516564 75 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 AC090281.1-201ENST00000523019 276 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.96□□□□□ -1.78
PF4V1P10720 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.96□□□□□ -1.78
PF4V1P10720 AC006349.1-201ENST00000555526 235 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 NDUFB4P11-201ENST00000560510 395 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 RN7SL652P-201ENST00000577769 300 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 MIR4691-201ENST00000583764 85 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 RN7SL52P-201ENST00000584271 284 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 MIR4424-201ENST00000585257 86 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC234771.5-201ENST00000600161 514 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC087783.2-201ENST00000605070 562 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 RMST_3.1-201ENST00000611651 109 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 RN7SL722P-201ENST00000617780 284 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 RN7SL565P-201ENST00000618246 284 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC019206.1-201ENST00000621938 425 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 AC066616.2-201ENST00000559334 1481 ntBASIC3.96□□□□□ -1.78
PF4V1P10720 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.96□□□□□ -1.78
PF4V1P10720 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PF4V1P10720 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PF4V1P10720 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PF4V1P10720 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PF4V1P10720 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PF4V1P10720 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
PF4V1P10720 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PF4V1P10720 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.96□□□□□ -1.78
PF4V1P10720 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 AC011266.1-201ENST00000624119 3569 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 AP001148.1-201ENST00000624124 2359 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 RNU6-140P-201ENST00000384566 108 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 FGF7P8-201ENST00000402994 292 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 AL592114.1-201ENST00000403842 483 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC3.95□□□□□ -1.78
PF4V1P10720 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.95□□□□□ -1.78
PF4V1P10720 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PF4V1P10720 OR2AM1P-201ENST00000422137 422 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.95□□□□□ -1.78
PF4V1P10720 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.95□□□□□ -1.78
PF4V1P10720 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.95□□□□□ -1.78
PF4V1P10720 HMGB1P31-201ENST00000437242 427 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.95□□□□□ -1.78
PF4V1P10720 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.95□□□□□ -1.78
PF4V1P10720 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.95□□□□□ -1.78
PF4V1P10720 AC112498.1-201ENST00000444401 332 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.95□□□□□ -1.78
PF4V1P10720 AC116533.1-201ENST00000459748 321 ntBASIC3.95□□□□□ -1.78
PF4V1P10720 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.95□□□□□ -1.78
PF4V1P10720 AC069439.1-201ENST00000494739 167 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms