Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC004853.1-201ENST00000604902 698 ntBASIC4.14□□□□□ -1.75
RHOP08100 AP003117.2-201ENST00000606010 545 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC113194.1-201ENST00000606037 500 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC069200.1-201ENST00000609511 323 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC005344.1-201ENST00000613391 459 ntBASIC4.14□□□□□ -1.75
RHOP08100 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RHOP08100 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.14□□□□□ -1.75
RHOP08100 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
RHOP08100 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 NMD3P1-201ENST00000439704 1488 ntBASIC4.13□□□□□ -1.75
RHOP08100 AP004289.2-201ENST00000444413 1457 ntBASIC4.13□□□□□ -1.75
RHOP08100 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RHOP08100 CKAP2P1-201ENST00000555477 2049 ntBASIC4.13□□□□□ -1.75
RHOP08100 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.13□□□□□ -1.75
RHOP08100 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RHOP08100 SNORA63.1-201ENST00000362493 131 ntBASIC4.13□□□□□ -1.75
RHOP08100 SNORD56.2-201ENST00000363242 71 ntBASIC4.13□□□□□ -1.75
RHOP08100 RNY4P16-201ENST00000364768 94 ntBASIC4.13□□□□□ -1.75
RHOP08100 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RHOP08100 SNORA11.1-201ENST00000408133 129 ntBASIC4.13□□□□□ -1.75
RHOP08100 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.13□□□□□ -1.75
RHOP08100 AC093578.1-201ENST00000415219 368 ntBASIC4.13□□□□□ -1.75
RHOP08100 MRPL50P2-201ENST00000416821 482 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC127526.1-201ENST00000417526 366 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.13□□□□□ -1.75
RHOP08100 UBE2V1P13-201ENST00000436983 439 ntBASIC4.13□□□□□ -1.75
RHOP08100 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.13□□□□□ -1.75
RHOP08100 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.13□□□□□ -1.75
RHOP08100 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.13□□□□□ -1.75
RHOP08100 TPT1P14-201ENST00000448018 505 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.13□□□□□ -1.75
RHOP08100 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.13□□□□□ -1.75
RHOP08100 AC022364.2-201ENST00000457963 554 ntBASIC4.13□□□□□ -1.75
RHOP08100 SNORD121B-201ENST00000458838 81 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC087385.1-201ENST00000475062 312 ntBASIC4.13□□□□□ -1.75
RHOP08100 RPL21P103-201ENST00000479921 488 ntBASIC4.13□□□□□ -1.75
RHOP08100 HMGN1P12-201ENST00000499125 195 ntBASIC4.13□□□□□ -1.75
RHOP08100 MTCO2P30-201ENST00000503662 364 ntBASIC4.13□□□□□ -1.75
RHOP08100 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.13□□□□□ -1.75
RHOP08100 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.13□□□□□ -1.75
RHOP08100 SNORA40.12-201ENST00000516329 111 ntBASIC4.13□□□□□ -1.75
RHOP08100 RNU1-95P-201ENST00000516357 160 ntBASIC4.13□□□□□ -1.75
RHOP08100 RNU1-128P-201ENST00000516704 160 ntBASIC4.13□□□□□ -1.75
RHOP08100 RNA5SP337-201ENST00000517007 109 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC026403.1-201ENST00000518938 295 ntBASIC4.13□□□□□ -1.75
RHOP08100 CENPUP1-201ENST00000526649 1202 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
RHOP08100 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.13□□□□□ -1.75
RHOP08100 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.13□□□□□ -1.75
RHOP08100 AC055876.1-202ENST00000567053 138 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.13□□□□□ -1.75
RHOP08100 AC060771.1-201ENST00000582031 164 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.13□□□□□ -1.75
RHOP08100 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.13□□□□□ -1.75
RHOP08100 AC005261.5-201ENST00000596280 355 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC105429.2-201ENST00000610567 517 ntBASIC4.13□□□□□ -1.75
RHOP08100 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.13□□□□□ -1.75
RHOP08100 AC006504.8-201ENST00000621046 635 ntBASIC4.13□□□□□ -1.75
RHOP08100 YWHAEP7-203ENST00000622054 312 ntBASIC4.13□□□□□ -1.75
RHOP08100 AC138649.5-201ENST00000637456 137 ntBASIC4.13□□□□□ -1.75
RHOP08100 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RHOP08100 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.13□□□□□ -1.75
RHOP08100 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
RHOP08100 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHOP08100 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.12□□□□□ -1.75
RHOP08100 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHOP08100 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RHOP08100 RNA5SP119-201ENST00000362715 117 ntBASIC4.12□□□□□ -1.75
RHOP08100 RNY1P12-201ENST00000364251 105 ntBASIC4.12□□□□□ -1.75
RHOP08100 MIR7-3-201ENST00000384898 110 ntBASIC4.12□□□□□ -1.75
RHOP08100 RNU2-15P-201ENST00000410692 191 ntBASIC4.12□□□□□ -1.75
RHOP08100 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.12□□□□□ -1.75
RHOP08100 ELOCP4-201ENST00000420090 333 ntBASIC4.12□□□□□ -1.75
RHOP08100 AC007283.2-201ENST00000424739 197 ntBASIC4.12□□□□□ -1.75
RHOP08100 AC137499.1-201ENST00000427602 88 ntBASIC4.12□□□□□ -1.75
RHOP08100 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.12□□□□□ -1.75
RHOP08100 GTF2IP20-201ENST00000431663 360 ntBASIC4.12□□□□□ -1.75
RHOP08100 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.12□□□□□ -1.75
RHOP08100 AC079781.2-201ENST00000446424 169 ntBASIC4.12□□□□□ -1.75
RHOP08100 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.12□□□□□ -1.75
RHOP08100 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.12□□□□□ -1.75
RHOP08100 SNRPGP6-201ENST00000451124 220 ntBASIC4.12□□□□□ -1.75
RHOP08100 AL353691.1-201ENST00000451332 387 ntBASIC4.12□□□□□ -1.75
RHOP08100 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.12□□□□□ -1.75
RHOP08100 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.12□□□□□ -1.75
RHOP08100 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.12□□□□□ -1.75
RHOP08100 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.12□□□□□ -1.75
RHOP08100 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms