Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DNAJC8P1-201ENST00000554535 372 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AP005136.1-201ENST00000579765 429 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.17□□□□□ -2.06
COL1A1P02452 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.17□□□□□ -2.06
COL1A1P02452 AC113368.1-201ENST00000603736 382 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 AC010872.1-201ENST00000624225 675 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
COL1A1P02452 AL049737.1-201ENST00000413920 1403 ntBASIC2.17□□□□□ -2.06
COL1A1P02452 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL1A1P02452 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL1A1P02452 KPNA2P1-201ENST00000458289 1591 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 AL021407.1-201ENST00000404531 386 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 MIR1276-201ENST00000408707 83 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 RNU4-62P-201ENST00000410125 130 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 RNU2-21P-201ENST00000410368 188 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.16□□□□□ -2.06
COL1A1P02452 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.16□□□□□ -2.06
COL1A1P02452 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.16□□□□□ -2.06
COL1A1P02452 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
COL1A1P02452 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.16□□□□□ -2.06
COL1A1P02452 MTND3P6-201ENST00000485242 339 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.16□□□□□ -2.06
COL1A1P02452 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.16□□□□□ -2.06
COL1A1P02452 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.16□□□□□ -2.06
COL1A1P02452 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.16□□□□□ -2.06
COL1A1P02452 AP000790.1-201ENST00000528891 737 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.16□□□□□ -2.06
COL1A1P02452 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.16□□□□□ -2.06
COL1A1P02452 DNAJC19P9-201ENST00000555084 351 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 AC067805.1-201ENST00000559344 470 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.16□□□□□ -2.06
COL1A1P02452 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.16□□□□□ -2.06
COL1A1P02452 AC009220.3-201ENST00000604318 586 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 AL590282.1-201ENST00000610379 1136 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 U73479.1-201ENST00000618062 168 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 AP003122.6-201ENST00000623831 495 ntBASIC2.16□□□□□ -2.06
COL1A1P02452 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL1A1P02452 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL1A1P02452 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
COL1A1P02452 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.15□□□□□ -2.06
COL1A1P02452 RPL17P12-201ENST00000413391 526 ntBASIC2.15□□□□□ -2.06
COL1A1P02452 NUP35P2-201ENST00000416748 943 ntBASIC2.15□□□□□ -2.06
COL1A1P02452 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.15□□□□□ -2.06
COL1A1P02452 AC010301.1-201ENST00000473936 355 ntBASIC2.15□□□□□ -2.06
COL1A1P02452 SUB1P3-201ENST00000564581 315 ntBASIC2.15□□□□□ -2.06
COL1A1P02452 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.15□□□□□ -2.06
COL1A1P02452 AC090751.1-201ENST00000566966 267 ntBASIC2.15□□□□□ -2.06
COL1A1P02452 AP001029.3-201ENST00000588063 596 ntBASIC2.15□□□□□ -2.06
COL1A1P02452 AC005021.1-201ENST00000608730 355 ntBASIC2.15□□□□□ -2.06
COL1A1P02452 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.15□□□□□ -2.06
COL1A1P02452 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.15□□□□□ -2.06
COL1A1P02452 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL1A1P02452 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
COL1A1P02452 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.15□□□□□ -2.07
COL1A1P02452 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL1A1P02452 SNORA51.11-201ENST00000384442 131 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AC114973.1-201ENST00000429057 632 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.14□□□□□ -2.07
COL1A1P02452 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.14□□□□□ -2.07
COL1A1P02452 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.14□□□□□ -2.07
COL1A1P02452 AC113398.2-201ENST00000507630 558 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.14□□□□□ -2.07
COL1A1P02452 RNU6-1004P-201ENST00000516584 111 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.14□□□□□ -2.07
COL1A1P02452 AC010546.1-201ENST00000569391 485 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AP001542.2-201ENST00000593141 364 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 RPL23AP88-201ENST00000605759 454 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL1A1P02452 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.14□□□□□ -2.07
COL1A1P02452 MTND4P31-201ENST00000425607 1343 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
COL1A1P02452 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL1A1P02452 RNU6-673P-201ENST00000365084 104 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 RNU6-629P-201ENST00000384061 103 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 RPL19P1-201ENST00000411635 428 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AP000275.1-201ENST00000411943 390 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 TOMM22P1-201ENST00000418578 312 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.14□□□□□ -2.07
COL1A1P02452 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL1A1P02452 RPS7P2-201ENST00000435134 607 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 CDC42P1-201ENST00000456658 548 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AC092798.1-201ENST00000458542 409 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AC140059.1-201ENST00000489238 361 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.14□□□□□ -2.07
COL1A1P02452 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.14□□□□□ -2.07
COL1A1P02452 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 RNU6-1308P-201ENST00000516817 103 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.14□□□□□ -2.07
COL1A1P02452 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.14□□□□□ -2.07
COL1A1P02452 RPS3AP4-201ENST00000555161 764 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
COL1A1P02452 AL590099.1-201ENST00000615276 138 ntBASIC2.14□□□□□ -2.07
COL1A1P02452 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.14□□□□□ -2.07
COL1A1P02452 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL1A1P02452 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.13□□□□□ -2.07
COL1A1P02452 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms