Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PSMA6P4-201ENST00000603247 718 ntBASIC4.42□□□□□ -1.7
CDKL5O76039 BRDTP1-201ENST00000605735 677 ntBASIC4.42□□□□□ -1.7
CDKL5O76039 AC087045.1-201ENST00000605856 382 ntBASIC4.42□□□□□ -1.7
CDKL5O76039 AL133173.2-201ENST00000614270 90 ntBASIC4.42□□□□□ -1.7
CDKL5O76039 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL5O76039 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL5O76039 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL5O76039 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL5O76039 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL5O76039 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.42□□□□□ -1.7
CDKL5O76039 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.42□□□□□ -1.7
CDKL5O76039 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 XPOTP1-201ENST00000443317 2398 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 NUP58P1-201ENST00000502546 1738 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
CDKL5O76039 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL5O76039 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 SNORD56.2-201ENST00000363242 71 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 RNU6-853P-201ENST00000364306 107 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 Y_RNA.263-201ENST00000364659 114 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 Y_RNA.381-201ENST00000365666 102 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 RNU6-1293P-201ENST00000384077 107 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 Y_RNA.509-201ENST00000384506 99 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 Y_RNA.535-201ENST00000384612 99 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 RPL23AP32-201ENST00000395315 459 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 RNU6-908P-201ENST00000410160 94 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL5O76039 RPL7P54-201ENST00000438336 674 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.41□□□□□ -1.7
CDKL5O76039 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL5O76039 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.41□□□□□ -1.7
CDKL5O76039 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CDKL5O76039 RN7SL323P-201ENST00000494712 295 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 RNA5SP309-201ENST00000516670 106 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 AC022695.1-201ENST00000522089 237 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 AC022861.1-201ENST00000522981 663 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 CENPUP1-201ENST00000526649 1202 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL5O76039 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL5O76039 LSM6P2-201ENST00000552208 177 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 AL138976.2-201ENST00000563989 694 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 AC053481.4-201ENST00000583164 216 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 AC007621.1-201ENST00000604544 437 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.41□□□□□ -1.7
CDKL5O76039 AC009159.1-201ENST00000618386 642 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 RNU6-156P-201ENST00000621869 107 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 FER-210ENST00000628534 558 ntTSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 AC010149.2-201ENST00000637608 315 ntBASIC4.41□□□□□ -1.7
CDKL5O76039 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDKL5O76039 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDKL5O76039 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.4□□□□□ -1.7
CDKL5O76039 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CDKL5O76039 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL5O76039 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDKL5O76039 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDKL5O76039 RNU5E-1-201ENST00000362477 120 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.4□□□□□ -1.71
CDKL5O76039 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
CDKL5O76039 RNU6-730P-201ENST00000383954 104 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 MT-TD-201ENST00000387419 68 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 snosnR66.1-201ENST00000391095 99 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 HSPE1P8-201ENST00000406997 288 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 Z98941.1-201ENST00000407764 100 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.4□□□□□ -1.71
CDKL5O76039 RPL36AP36-201ENST00000418616 301 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.4□□□□□ -1.71
CDKL5O76039 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.4□□□□□ -1.71
CDKL5O76039 AL353777.1-201ENST00000425552 326 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.4□□□□□ -1.71
CDKL5O76039 AC004975.1-201ENST00000428733 208 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC091390.1-201ENST00000433904 331 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC092013.1-201ENST00000438795 332 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 SNORA71B-202ENST00000439232 272 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.4□□□□□ -1.71
CDKL5O76039 AC005297.2-201ENST00000450430 606 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 HMGB3P21-201ENST00000452483 547 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 RPL7P15-201ENST00000461190 712 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AP000893.1-201ENST00000474462 794 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC087385.1-201ENST00000475062 312 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 VN1R105P-201ENST00000486595 910 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC093267.1-201ENST00000489176 961 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC023194.1-201ENST00000493084 308 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AL139099.1-201ENST00000497398 403 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 NDUFB4P9-201ENST00000511646 388 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.4□□□□□ -1.71
CDKL5O76039 RNA5SP208-201ENST00000516156 78 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 Vault.3-201ENST00000516676 95 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 NARSP2-201ENST00000518524 679 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.4□□□□□ -1.71
CDKL5O76039 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.4□□□□□ -1.71
CDKL5O76039 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.4□□□□□ -1.71
CDKL5O76039 HIF1AP1-201ENST00000553642 175 ntBASIC4.4□□□□□ -1.71
CDKL5O76039 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.4□□□□□ -1.71
CDKL5O76039 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.4□□□□□ -1.71
CDKL5O76039 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms