Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.32□□□□□ -1.88
PRKNO60260 KLKP1-201ENST00000595979 403 ntBASIC3.32□□□□□ -1.88
PRKNO60260 CKS1BP3-201ENST00000600888 237 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AL161729.4-201ENST00000604650 476 ntBASIC3.32□□□□□ -1.88
PRKNO60260 RNU6-87P-201ENST00000607561 108 ntBASIC3.32□□□□□ -1.88
PRKNO60260 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.32□□□□□ -1.88
PRKNO60260 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 MIR6075-201ENST00000620782 95 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AL158801.5-201ENST00000623123 465 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AC095031.1-201ENST00000623685 672 ntBASIC3.32□□□□□ -1.88
PRKNO60260 OR5AK4P-201ENST00000635912 903 ntBASIC3.32□□□□□ -1.88
PRKNO60260 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PRKNO60260 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 MTND5P33-201ENST00000571250 1450 ntBASIC3.32□□□□□ -1.88
PRKNO60260 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.32□□□□□ -1.88
PRKNO60260 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PRKNO60260 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
PRKNO60260 FARSBP1-201ENST00000435808 1778 ntBASIC3.31□□□□□ -1.88
PRKNO60260 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.31□□□□□ -1.88
PRKNO60260 FRG1BP-201ENST00000278882 761 ntBASIC3.31□□□□□ -1.88
PRKNO60260 RNU1-18P-201ENST00000363062 164 ntBASIC3.31□□□□□ -1.88
PRKNO60260 RN7SKP226-201ENST00000364912 300 ntBASIC3.31□□□□□ -1.88
PRKNO60260 MIR490-201ENST00000384865 128 ntBASIC3.31□□□□□ -1.88
PRKNO60260 U3.20-201ENST00000390909 217 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AL138878.1-201ENST00000405131 347 ntBASIC3.31□□□□□ -1.88
PRKNO60260 MTHFD2P2-201ENST00000407725 247 ntBASIC3.31□□□□□ -1.88
PRKNO60260 RNU2-47P-201ENST00000410649 186 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.31□□□□□ -1.88
PRKNO60260 CRYBB2P1-203ENST00000415709 538 ntBASIC3.31□□□□□ -1.88
PRKNO60260 USP9YP36-201ENST00000424581 829 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AL353777.1-201ENST00000425552 326 ntBASIC3.31□□□□□ -1.88
PRKNO60260 MTCO3P30-201ENST00000426425 670 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AL589872.1-201ENST00000426602 288 ntBASIC3.31□□□□□ -1.88
PRKNO60260 YME1L1P1-201ENST00000429435 297 ntBASIC3.31□□□□□ -1.88
PRKNO60260 CYCSP4-201ENST00000429682 331 ntBASIC3.31□□□□□ -1.88
PRKNO60260 CYCSP43-201ENST00000438233 310 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC108734.1-201ENST00000439549 399 ntBASIC3.31□□□□□ -1.88
PRKNO60260 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
PRKNO60260 HMGN2P21-201ENST00000447764 270 ntBASIC3.31□□□□□ -1.88
PRKNO60260 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.31□□□□□ -1.88
PRKNO60260 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.31□□□□□ -1.88
PRKNO60260 RN7SL93P-201ENST00000463035 293 ntBASIC3.31□□□□□ -1.88
PRKNO60260 HMGB1P25-201ENST00000468402 607 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC105252.1-201ENST00000503089 286 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC107401.1-201ENST00000503426 685 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.31□□□□□ -1.88
PRKNO60260 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.31□□□□□ -1.88
PRKNO60260 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
PRKNO60260 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.31□□□□□ -1.88
PRKNO60260 Y_RNA.672-201ENST00000516289 104 ntBASIC3.31□□□□□ -1.88
PRKNO60260 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.31□□□□□ -1.88
PRKNO60260 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.31□□□□□ -1.88
PRKNO60260 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.31□□□□□ -1.88
PRKNO60260 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.31□□□□□ -1.88
PRKNO60260 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC107016.1-201ENST00000550463 337 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.31□□□□□ -1.88
PRKNO60260 MIR3682-201ENST00000581338 84 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AL365503.1-201ENST00000605247 905 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AL355472.4-201ENST00000610233 626 ntBASIC3.31□□□□□ -1.88
PRKNO60260 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.31□□□□□ -1.88
PRKNO60260 AC138649.3-201ENST00000622154 254 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC243312.2-201ENST00000623340 601 ntBASIC3.31□□□□□ -1.88
PRKNO60260 AC006065.5-201ENST00000623427 349 ntBASIC3.31□□□□□ -1.88
PRKNO60260 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRKNO60260 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PRKNO60260 EXOC5P1-201ENST00000510543 1969 ntBASIC3.31□□□□□ -1.88
PRKNO60260 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 AC027287.1-201ENST00000553115 1453 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AL365440.1-201ENST00000436135 2167 ntBASIC3.3□□□□□ -1.88
PRKNO60260 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PRKNO60260 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRKNO60260 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
PRKNO60260 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PRKNO60260 RNA5SP167-201ENST00000365461 116 ntBASIC3.3□□□□□ -1.88
PRKNO60260 RNU6-359P-201ENST00000365466 108 ntBASIC3.3□□□□□ -1.88
PRKNO60260 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
PRKNO60260 RNU6-114P-201ENST00000384704 105 ntBASIC3.3□□□□□ -1.88
PRKNO60260 FCF1P9-201ENST00000412546 282 ntBASIC3.3□□□□□ -1.88
PRKNO60260 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.3□□□□□ -1.88
PRKNO60260 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.3□□□□□ -1.88
PRKNO60260 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.3□□□□□ -1.88
PRKNO60260 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.3□□□□□ -1.88
PRKNO60260 AL358934.1-201ENST00000432346 324 ntBASIC3.3□□□□□ -1.88
PRKNO60260 AC009961.2-201ENST00000435771 251 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms