Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AP005403.1-201ENST00000579720 229 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AL138895.2-201ENST00000603019 178 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 AL034351.1-201ENST00000605288 668 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
ACTN4O43707 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
ACTN4O43707 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
ACTN4O43707 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
ACTN4O43707 AC097063.1-201ENST00000426714 1797 ntBASIC6.16□□□□□ -1.42
ACTN4O43707 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.16□□□□□ -1.42
ACTN4O43707 AC008758.3-201ENST00000507003 1829 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC006484.1-201ENST00000435086 1884 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
ACTN4O43707 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
ACTN4O43707 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.15□□□□□ -1.42
ACTN4O43707 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
ACTN4O43707 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
ACTN4O43707 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
ACTN4O43707 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ACTN4O43707 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
ACTN4O43707 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.15□□□□□ -1.42
ACTN4O43707 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
ACTN4O43707 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ACTN4O43707 RPL9P7-201ENST00000330965 580 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 SNORA5.1-201ENST00000384275 131 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 U3.39-201ENST00000408569 239 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.15□□□□□ -1.42
ACTN4O43707 AC093414.1-201ENST00000434712 514 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AL513043.1-201ENST00000439124 535 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.15□□□□□ -1.42
ACTN4O43707 AC090804.1-201ENST00000448870 490 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC022431.1-201ENST00000450941 438 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AL445665.1-202ENST00000452436 324 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.15□□□□□ -1.42
ACTN4O43707 RPL9P9-202ENST00000466501 579 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC022133.1-201ENST00000490961 571 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC006499.3-201ENST00000506077 748 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 GSTP1P1-201ENST00000548078 319 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.15□□□□□ -1.42
ACTN4O43707 MRPS21P7-201ENST00000566937 238 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.15□□□□□ -1.42
ACTN4O43707 LRRC37A5P-203ENST00000580181 585 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 AC006077.1-201ENST00000604746 343 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.15□□□□□ -1.42
ACTN4O43707 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.15□□□□□ -1.42
ACTN4O43707 AC000374.1-201ENST00000434698 1745 ntBASIC6.15□□□□□ -1.42
ACTN4O43707 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ACTN4O43707 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.15□□□□□ -1.43
ACTN4O43707 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ACTN4O43707 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
ACTN4O43707 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
ACTN4O43707 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ACTN4O43707 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ACTN4O43707 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ACTN4O43707 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
ACTN4O43707 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
ACTN4O43707 AC092747.4-201ENST00000620519 1861 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ACTN4O43707 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.14□□□□□ -1.43
ACTN4O43707 Y_RNA.358-201ENST00000365491 99 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 Y_RNA.418-201ENST00000384029 102 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 SNORA16A-201ENST00000384342 137 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 RNU6-102P-201ENST00000384485 104 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 AL079342.1-201ENST00000401460 267 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 RNU4-78P-201ENST00000410940 126 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 RNU6-607P-201ENST00000411283 108 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 EI24P1-201ENST00000416584 867 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 AC099677.1-201ENST00000420575 175 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.14□□□□□ -1.43
ACTN4O43707 AC004938.1-201ENST00000438468 308 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 AL360271.2-201ENST00000447710 161 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 RPS11P1-201ENST00000451072 473 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 AL133445.1-201ENST00000467051 452 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.14□□□□□ -1.43
ACTN4O43707 AC018442.3-201ENST00000523025 183 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 AP004609.2-201ENST00000532177 190 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.14□□□□□ -1.43
ACTN4O43707 AC018552.1-201ENST00000562099 811 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 NF1P5-201ENST00000588287 448 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 BDH2P1-201ENST00000602288 736 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 AL162424.1-201ENST00000602325 221 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.14□□□□□ -1.43
ACTN4O43707 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.14□□□□□ -1.43
ACTN4O43707 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ACTN4O43707 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ACTN4O43707 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ACTN4O43707 PROS2P-201ENST00000474651 1951 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
ACTN4O43707 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ACTN4O43707 AC008725.1-201ENST00000605123 2263 ntBASIC6.14□□□□□ -1.43
ACTN4O43707 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ACTN4O43707 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.14□□□□□ -1.43
ACTN4O43707 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ACTN4O43707 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ACTN4O43707 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ACTN4O43707 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.13□□□□□ -1.43
ACTN4O43707 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ACTN4O43707 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.13□□□□□ -1.43
ACTN4O43707 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms