Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC9.18□□□□□ -0.94
MSH5O43196 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
MSH5O43196 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
MSH5O43196 RNU6-170P-201ENST00000362832 104 ntBASIC9.17□□□□□ -0.94
MSH5O43196 SNORD35A-201ENST00000363389 86 ntBASIC9.17□□□□□ -0.94
MSH5O43196 RNA5SP472-201ENST00000363868 119 ntBASIC9.17□□□□□ -0.94
MSH5O43196 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 ENSAP1-201ENST00000392855 326 ntBASIC9.17□□□□□ -0.94
MSH5O43196 RN7SKP101-201ENST00000411376 320 ntBASIC9.17□□□□□ -0.94
MSH5O43196 AC092447.6-201ENST00000414578 210 ntBASIC9.17□□□□□ -0.94
MSH5O43196 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC9.17□□□□□ -0.94
MSH5O43196 RPL31P13-201ENST00000484151 370 ntBASIC9.17□□□□□ -0.94
MSH5O43196 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC9.17□□□□□ -0.94
MSH5O43196 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC9.17□□□□□ -0.94
MSH5O43196 RNU6-523P-201ENST00000516304 54 ntBASIC9.17□□□□□ -0.94
MSH5O43196 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC9.17□□□□□ -0.94
MSH5O43196 UBE2Q2P8-201ENST00000560644 102 ntBASIC9.17□□□□□ -0.94
MSH5O43196 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC9.17□□□□□ -0.94
MSH5O43196 AC097381.3-201ENST00000608962 462 ntBASIC9.17□□□□□ -0.94
MSH5O43196 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC9.17□□□□□ -0.94
MSH5O43196 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
MSH5O43196 AC123769.1-201ENST00000530992 3192 ntBASIC9.17□□□□□ -0.94
MSH5O43196 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
MSH5O43196 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MSH5O43196 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
MSH5O43196 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
MSH5O43196 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC9.16□□□□□ -0.94
MSH5O43196 AC093831.2-201ENST00000624393 3427 ntBASIC9.16□□□□□ -0.94
MSH5O43196 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC9.16□□□□□ -0.94
MSH5O43196 RNA5SP382-201ENST00000363355 112 ntBASIC9.16□□□□□ -0.94
MSH5O43196 MIR199B-201ENST00000384849 110 ntBASIC9.16□□□□□ -0.94
MSH5O43196 MIR152-201ENST00000385212 87 ntBASIC9.16□□□□□ -0.94
MSH5O43196 MIR549A-201ENST00000385268 96 ntBASIC9.16□□□□□ -0.94
MSH5O43196 MT-TI-201ENST00000387365 69 ntBASIC9.16□□□□□ -0.94
MSH5O43196 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
MSH5O43196 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
MSH5O43196 AL121835.1-201ENST00000404250 354 ntBASIC9.16□□□□□ -0.94
MSH5O43196 MTND6P12-201ENST00000428247 522 ntBASIC9.16□□□□□ -0.94
MSH5O43196 AC243964.1-201ENST00000441814 261 ntBASIC9.16□□□□□ -0.94
MSH5O43196 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 snoU109.4-201ENST00000458953 143 ntBASIC9.16□□□□□ -0.94
MSH5O43196 RNU7-115P-201ENST00000516433 55 ntBASIC9.16□□□□□ -0.94
MSH5O43196 RNA5SP153-201ENST00000516498 76 ntBASIC9.16□□□□□ -0.94
MSH5O43196 AC109329.2-201ENST00000519658 482 ntBASIC9.16□□□□□ -0.94
MSH5O43196 MIR5571-201ENST00000577998 113 ntBASIC9.16□□□□□ -0.94
MSH5O43196 MIR548Z-201ENST00000584743 97 ntBASIC9.16□□□□□ -0.94
MSH5O43196 AC008507.4-201ENST00000585464 127 ntBASIC9.16□□□□□ -0.94
MSH5O43196 AC012368.3-201ENST00000604190 219 ntBASIC9.16□□□□□ -0.94
MSH5O43196 RPL12P48-201ENST00000605620 304 ntBASIC9.16□□□□□ -0.94
MSH5O43196 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC9.16□□□□□ -0.94
MSH5O43196 AC068213.1-201ENST00000625124 226 ntBASIC9.16□□□□□ -0.94
MSH5O43196 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
MSH5O43196 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC9.16□□□□□ -0.94
MSH5O43196 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC9.16□□□□□ -0.94
MSH5O43196 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
MSH5O43196 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC9.16□□□□□ -0.94
MSH5O43196 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MSH5O43196 MAPK10-261ENST00000641050 3109 ntBASIC9.16□□□□□ -0.94
MSH5O43196 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC9.15□□□□□ -0.94
MSH5O43196 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
MSH5O43196 AC010401.2-201ENST00000575137 4934 ntBASIC9.15□□□□□ -0.94
MSH5O43196 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
MSH5O43196 RNU6-1209P-201ENST00000363655 107 ntBASIC9.15□□□□□ -0.94
MSH5O43196 U1.1-201ENST00000384101 164 ntBASIC9.15□□□□□ -0.94
MSH5O43196 Z98742.3-201ENST00000418637 326 ntBASIC9.15□□□□□ -0.94
MSH5O43196 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC9.15□□□□□ -0.94
MSH5O43196 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC9.15□□□□□ -0.94
MSH5O43196 RNU6ATAC12P-201ENST00000516542 115 ntBASIC9.15□□□□□ -0.94
MSH5O43196 OR5M6P-201ENST00000530227 937 ntBASIC9.15□□□□□ -0.94
MSH5O43196 AL049861.1-201ENST00000603130 150 ntBASIC9.15□□□□□ -0.94
MSH5O43196 5S_rRNA.29-201ENST00000641250 107 ntBASIC9.15□□□□□ -0.94
MSH5O43196 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC9.15□□□□□ -0.94
MSH5O43196 ALB-202ENST00000401494 1659 ntTSL 5 BASIC9.15□□□□□ -0.94
MSH5O43196 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
MSH5O43196 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.15□□□□□ -0.94
MSH5O43196 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC9.15□□□□□ -0.95
MSH5O43196 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC9.15□□□□□ -0.95
MSH5O43196 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
MSH5O43196 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
MSH5O43196 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
MSH5O43196 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
MSH5O43196 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.14□□□□□ -0.95
MSH5O43196 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
MSH5O43196 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
MSH5O43196 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
MSH5O43196 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms