Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 UBE2D3P2-201ENST00000424409 445 ntBASIC3.42□□□□□ -1.86
O00370 RPL23AP83-201ENST00000434984 473 ntBASIC3.42□□□□□ -1.86
O00370 SNRPEP4-201ENST00000435815 279 ntBASIC3.42□□□□□ -1.86
O00370 LSM1P1-201ENST00000438629 273 ntBASIC3.42□□□□□ -1.86
O00370 SDCBPP1-201ENST00000440192 890 ntBASIC3.42□□□□□ -1.86
O00370 AL831737.1-201ENST00000441288 271 ntBASIC3.42□□□□□ -1.86
O00370 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.42□□□□□ -1.86
O00370 AL606662.1-201ENST00000445763 553 ntBASIC3.42□□□□□ -1.86
O00370 AC146507.2-201ENST00000460608 476 ntBASIC3.42□□□□□ -1.86
O00370 AL358832.1-201ENST00000497800 389 ntBASIC3.42□□□□□ -1.86
O00370 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.42□□□□□ -1.86
O00370 AC093677.1-201ENST00000514414 678 ntBASIC3.42□□□□□ -1.86
O00370 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
O00370 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
O00370 OR7K1P-201ENST00000546439 926 ntBASIC3.42□□□□□ -1.86
O00370 EEF1B2P4-201ENST00000551398 348 ntBASIC3.42□□□□□ -1.86
O00370 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.42□□□□□ -1.86
O00370 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.42□□□□□ -1.86
O00370 AC002076.2-201ENST00000617362 122 ntBASIC3.42□□□□□ -1.86
O00370 AC091931.1-201ENST00000623488 728 ntBASIC3.42□□□□□ -1.86
O00370 AC007494.3-201ENST00000624660 743 ntBASIC3.42□□□□□ -1.86
O00370 CU459211.1-201ENST00000635667 749 ntBASIC3.42□□□□□ -1.86
O00370 CRYM-AS1-204ENST00000637983 556 ntBASIC3.42□□□□□ -1.86
O00370 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
O00370 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
O00370 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.41□□□□□ -1.86
O00370 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
O00370 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
O00370 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
O00370 RNU5F-7P-201ENST00000363696 115 ntBASIC3.41□□□□□ -1.86
O00370 RNU6-343P-201ENST00000364709 104 ntBASIC3.41□□□□□ -1.86
O00370 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.41□□□□□ -1.86
O00370 HMGB1P11-201ENST00000413899 637 ntBASIC3.41□□□□□ -1.86
O00370 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.41□□□□□ -1.86
O00370 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 MTCO2P5-201ENST00000422621 426 ntBASIC3.41□□□□□ -1.86
O00370 AC012498.1-201ENST00000424037 437 ntBASIC3.41□□□□□ -1.86
O00370 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.41□□□□□ -1.86
O00370 AC007742.1-201ENST00000425789 329 ntBASIC3.41□□□□□ -1.86
O00370 AL353705.1-201ENST00000433468 480 ntBASIC3.41□□□□□ -1.86
O00370 ELOCP26-201ENST00000436067 329 ntBASIC3.41□□□□□ -1.86
O00370 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.41□□□□□ -1.86
O00370 MTCYBP39-201ENST00000437562 491 ntBASIC3.41□□□□□ -1.86
O00370 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.41□□□□□ -1.86
O00370 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 SUMO2P2-201ENST00000456482 255 ntBASIC3.41□□□□□ -1.86
O00370 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.41□□□□□ -1.86
O00370 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.41□□□□□ -1.86
O00370 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.41□□□□□ -1.86
O00370 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 HSPA8P13-201ENST00000523715 472 ntBASIC3.41□□□□□ -1.86
O00370 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.41□□□□□ -1.86
O00370 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
O00370 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 AC013828.2-201ENST00000532487 235 ntBASIC3.41□□□□□ -1.86
O00370 AC018630.1-201ENST00000541376 925 ntBASIC3.41□□□□□ -1.86
O00370 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 AC007954.1-201ENST00000554198 494 ntBASIC3.41□□□□□ -1.86
O00370 OR4T1P-201ENST00000554933 911 ntBASIC3.41□□□□□ -1.86
O00370 AL391156.1-201ENST00000554965 554 ntBASIC3.41□□□□□ -1.86
O00370 AC090888.1-201ENST00000561335 1141 ntBASIC3.41□□□□□ -1.86
O00370 AC109446.2-201ENST00000567872 497 ntBASIC3.41□□□□□ -1.86
O00370 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.41□□□□□ -1.86
O00370 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.41□□□□□ -1.86
O00370 AL606834.2-201ENST00000602954 668 ntBASIC3.41□□□□□ -1.86
O00370 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.41□□□□□ -1.86
O00370 AC072039.2-201ENST00000608883 439 ntBASIC3.41□□□□□ -1.86
O00370 AC106028.5-201ENST00000610332 395 ntBASIC3.41□□□□□ -1.86
O00370 AC096577.2-201ENST00000611455 153 ntBASIC3.41□□□□□ -1.86
O00370 AC004223.4-201ENST00000612426 332 ntBASIC3.41□□□□□ -1.86
O00370 AC100793.4-201ENST00000613683 429 ntBASIC3.41□□□□□ -1.86
O00370 AL603755.1-201ENST00000619504 163 ntBASIC3.41□□□□□ -1.86
O00370 AC006111.3-201ENST00000622137 383 ntBASIC3.41□□□□□ -1.86
O00370 AC079248.2-201ENST00000623779 326 ntBASIC3.41□□□□□ -1.86
O00370 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.41□□□□□ -1.86
O00370 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
O00370 AC005183.1-201ENST00000603687 1979 ntBASIC3.41□□□□□ -1.86
O00370 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
O00370 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.41□□□□□ -1.86
O00370 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
O00370 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
O00370 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
O00370 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
O00370 RNU6-462P-201ENST00000362659 105 ntBASIC3.4□□□□□ -1.87
O00370 U3.6-201ENST00000363622 211 ntBASIC3.4□□□□□ -1.87
O00370 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.4□□□□□ -1.87
O00370 NDUFB4P5-201ENST00000415445 361 ntBASIC3.4□□□□□ -1.87
O00370 MRPL50P2-201ENST00000416821 482 ntBASIC3.4□□□□□ -1.87
O00370 AC099677.1-201ENST00000420575 175 ntBASIC3.4□□□□□ -1.87
O00370 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.4□□□□□ -1.87
O00370 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.4□□□□□ -1.87
O00370 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.4□□□□□ -1.87
O00370 MTND4LP10-201ENST00000435146 291 ntBASIC3.4□□□□□ -1.87
O00370 AC091862.1-201ENST00000438016 1100 ntBASIC3.4□□□□□ -1.87
O00370 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.4□□□□□ -1.87
O00370 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms