Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC055876.1-202ENST00000567053 138 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 MIR4307-201ENST00000582802 84 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC068313.1-201ENST00000604028 1008 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC091965.4-201ENST00000607691 587 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC122133.1-201ENST00000613964 233 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC009268.2-201ENST00000621925 457 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC006378.2-201ENST00000623178 2476 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC009902.3-201ENST00000606235 2172 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 CCT4P2-201ENST00000233836 1548 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC118273.1-201ENST00000525324 3006 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AL049781.1-201ENST00000623195 3585 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 U8.14-201ENST00000390843 143 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AL136116.1-201ENST00000403591 381 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 CCNG1P1-201ENST00000406783 885 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 U3.42-201ENST00000408746 214 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC107081.1-201ENST00000414975 361 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 PPP1R11P2-201ENST00000423543 382 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 LARP1BP3-201ENST00000437229 869 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 SSXP4-201ENST00000451349 245 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC084357.1-201ENST00000473404 255 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 RPL31P60-201ENST00000478450 367 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 FAM60DP-201ENST00000524174 632 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC105224.1-201ENST00000587055 421 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AL160281.1-201ENST00000605307 311 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AF246928.1-201ENST00000623768 87 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC019226.2-201ENST00000625973 424 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 ZNF826P-207ENST00000622273 1910 ntBASIC3.13□□□□□ -1.91
NPIPA3F8WFD2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 MTND5P33-201ENST00000571250 1450 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 RNU5A-1-201ENST00000362698 116 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 RNU6-553P-201ENST00000364047 96 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 SNORA38.1-201ENST00000364172 131 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 U3.19-201ENST00000390893 196 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL049545.1-201ENST00000401856 572 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 RNU6-920P-201ENST00000410926 92 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL365203.2-201ENST00000423444 196 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC005300.1-201ENST00000428401 373 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC005326.1-201ENST00000429197 123 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL357552.1-201ENST00000445254 415 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 TPT1P14-201ENST00000448018 505 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AP1S2P1-201ENST00000457344 379 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 MTCO1P42-201ENST00000457379 726 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 RN7SL807P-201ENST00000470923 297 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 RPL30P6-201ENST00000475925 342 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC112198.1-201ENST00000505369 1220 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AC005178.1-201ENST00000508392 440 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 AL359273.1-201ENST00000510918 627 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 ARL2BPP6-201ENST00000512757 439 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 RN7SKP57-201ENST00000517248 293 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 IGKV2-26-201ENST00000518305 343 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 HMGN1P28-201ENST00000521340 364 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 ERHP1-201ENST00000523006 310 ntBASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NPIPA3F8WFD2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms