Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC187A0A096LP49 AL138713.1-201ENST00000624026 2130 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RNU6-1249P-201ENST00000363237 111 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RNU5A-8P-201ENST00000364102 114 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RNU6-335P-201ENST00000364563 113 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RNY4P16-201ENST00000364768 94 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RNU6-692P-201ENST00000384496 107 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 SNORA11.1-201ENST00000408133 129 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 HSPE1P12-201ENST00000412576 301 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 PDSS1P1-201ENST00000422953 1114 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC019097.1-201ENST00000424783 735 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 ATP5HP2-201ENST00000433885 485 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 KCTD9P3-201ENST00000434597 1169 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 FTH1P1-201ENST00000437933 532 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 USP9YP15-201ENST00000442391 422 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RPS17P13-201ENST00000448974 407 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 MTND1P12-201ENST00000455231 147 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 MTCO2P29-201ENST00000465212 189 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RPL23AP65-201ENST00000475608 468 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 RPS29P25-201ENST00000481709 171 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC078918.1-201ENST00000498515 228 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC019235.1-201ENST00000503847 207 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AL845331.3-202ENST00000562856 261 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 COX6CP3-201ENST00000580869 223 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC022432.1-201ENST00000595739 310 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 SNRPGP15-201ENST00000600149 222 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 KC877982.1-201ENST00000602313 470 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC068790.5-201ENST00000602741 355 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 AC006254.3-201ENST00000603353 884 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 MIR98-201ENST00000606724 119 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 PART1_1.1-201ENST00000611761 217 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 MIR7151-201ENST00000617477 60 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 MIR6863-201ENST00000636112 90 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 EOGT-210ENST00000615922 1931 ntBASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC187A0A096LP49 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 SNORA60-201ENST00000362396 134 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 SNORA71.3-201ENST00000362582 128 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 RNU4-1-201ENST00000363925 141 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 Y_RNA.263-201ENST00000364659 114 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 RNA5SP167-201ENST00000365461 116 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 RNU6-1103P-201ENST00000384150 107 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 Y_RNA.453-201ENST00000384223 109 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 MIR19A-201ENST00000384878 82 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 RNU6-876P-201ENST00000391295 104 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AL356057.2-201ENST00000403318 432 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AL583834.1-201ENST00000406943 343 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 RNU4-55P-201ENST00000410731 137 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 VDAC1P9-201ENST00000412766 841 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AL137014.1-201ENST00000420490 1226 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 TIMM9P3-201ENST00000428659 274 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 GOT2P5-201ENST00000433995 546 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AL451074.3-201ENST00000437709 472 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AC010655.1-201ENST00000449336 292 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 FABP3P2-201ENST00000453169 399 ntBASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC187A0A096LP49 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms