Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 TMEM183AP1-205ENST00000432739 290 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 CEACAMP1-201ENST00000434624 1035 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 AC073850.1-201ENST00000449243 255 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 RPL12P39-201ENST00000455456 496 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 U8.22-201ENST00000459141 133 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 NDUFB5P1-201ENST00000508134 564 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 RNU7-110P-201ENST00000516891 62 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 AC115990.1-201ENST00000526957 301 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 TUG1_4.1-201ENST00000619464 181 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.52□□□□□ -1.2
CCDC61Q9Y6R9 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 RNU6-1301P-201ENST00000362724 104 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 RPL11P3-201ENST00000395256 523 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 RN7SKP114-201ENST00000410327 279 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AC127537.2-201ENST00000439258 465 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 RPS27AP9-201ENST00000477681 438 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AC020890.1-201ENST00000491837 504 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 SNORA25.12-201ENST00000516202 82 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 RNU6-390P-201ENST00000516259 103 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 OR1F2P-201ENST00000570470 933 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AC090617.3-201ENST00000573670 475 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 RN7SL802P-201ENST00000577858 299 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 MIR6798-201ENST00000612887 67 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AL078621.3-201ENST00000623707 2042 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 AC010329.1-201ENST00000593903 8328 ntBASIC7.52□□□□□ -1.21
CCDC61Q9Y6R9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AC018809.2-201ENST00000602436 3823 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 Y_RNA.7-201ENST00000362352 102 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 RNU4-56P-201ENST00000364700 142 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 RNU6-429P-201ENST00000384582 108 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 RNU11-4P-201ENST00000391149 133 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 U3.35-201ENST00000408405 208 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 RNA5SP487-201ENST00000410186 122 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AL512844.2-201ENST00000433990 593 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 CYCSP43-201ENST00000438233 310 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 GAPDHP25-201ENST00000447061 1001 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AC010655.1-201ENST00000449336 292 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 EEF1B2P7-201ENST00000451177 676 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AP005403.1-201ENST00000579720 229 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 AC009314.1-201ENST00000603871 304 ntBASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.51□□□□□ -1.21
CCDC61Q9Y6R9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 RNU6-288P-201ENST00000363690 104 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 Y_RNA.563-201ENST00000384707 108 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 RPL21P40-201ENST00000428586 483 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 AL360271.2-201ENST00000447710 161 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 AC034236.1-201ENST00000469891 373 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 AC022795.1-201ENST00000473808 480 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 RPS26P21-201ENST00000475397 348 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 RN7SKP66-201ENST00000516681 231 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 Y_RNA.709-201ENST00000516952 92 ntBASIC7.5□□□□□ -1.21
CCDC61Q9Y6R9 RNA5SP373-201ENST00000517271 95 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms