Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 snoU13.3-201ENST00000459441 104 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 RPL23AP11-201ENST00000475260 469 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 YWHAEP4-201ENST00000505390 198 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC093752.1-206ENST00000511823 336 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC021451.1-201ENST00000523498 1129 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC008127.2-201ENST00000549925 1075 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC104984.5-201ENST00000586878 94 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC069431.2-201ENST00000604149 1099 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC090116.1-201ENST00000615679 446 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC069528.2-201ENST00000624849 1991 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 API5P2-201ENST00000397055 1498 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AL024474.1-201ENST00000404655 591 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 RNA5SP56-201ENST00000410277 118 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC080125.1-201ENST00000414888 684 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 NANOGP5-201ENST00000424456 877 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AL035410.1-201ENST00000427409 427 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 SEPT7P5-201ENST00000434048 306 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 MTCO1P53-201ENST00000441633 699 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 RPL39P40-201ENST00000445481 146 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC079776.3-201ENST00000450665 370 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 SSXP4-201ENST00000451349 245 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 SNORA48.10-201ENST00000516965 160 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 RNU6-1073P-201ENST00000517182 106 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC091163.3-201ENST00000518269 1144 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 MIR3912-201ENST00000577566 105 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC021749.1-201ENST00000604322 607 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC092954.1-201ENST00000609121 445 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC046143.2-201ENST00000609789 160 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AC084824.4-201ENST00000620106 731 ntBASIC3.17□□□□□ -1.9
USP16Q9Y5T5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.17□□□□□ -1.9
USP16Q9Y5T5 AP005901.5-201ENST00000545779 1796 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 RNU6-629P-201ENST00000384061 103 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 MIR506-201ENST00000384998 124 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 MIR122-201ENST00000385044 85 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 SNORD65.1-201ENST00000390889 71 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC007435.1-201ENST00000421086 415 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 RAC1P8-201ENST00000427086 527 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AL513124.1-201ENST00000450410 614 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC013828.1-201ENST00000481845 158 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC084024.2-201ENST00000503480 791 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC113347.3-201ENST00000509113 148 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC123904.3-201ENST00000547218 814 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC010975.3-201ENST00000618727 978 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 AC009318.4-201ENST00000620496 486 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP16Q9Y5T5 GDI2P1-201ENST00000429312 1336 ntBASIC3.16□□□□□ -1.9
USP16Q9Y5T5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.15□□□□□ -1.9
USP16Q9Y5T5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
USP16Q9Y5T5 AP001350.1-201ENST00000601906 1524 ntBASIC3.15□□□□□ -1.9
USP16Q9Y5T5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.91
USP16Q9Y5T5 RNA5SP456-201ENST00000364002 114 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 MIR592-201ENST00000384959 97 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 RNU2-28P-201ENST00000410457 189 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.15□□□□□ -1.91
USP16Q9Y5T5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
USP16Q9Y5T5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.15□□□□□ -1.91
USP16Q9Y5T5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.15□□□□□ -1.91
USP16Q9Y5T5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.15□□□□□ -1.91
USP16Q9Y5T5 RPL21P66-201ENST00000426566 466 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 RPL23AP74-201ENST00000437246 471 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.15□□□□□ -1.91
USP16Q9Y5T5 ELOCP13-201ENST00000443934 329 ntBASIC3.15□□□□□ -1.91
USP16Q9Y5T5 AL031313.1-201ENST00000448435 256 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms