Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 MIR375-201ENST00000362103 64 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 SNORA64.1-201ENST00000362600 132 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 RNU6-249P-201ENST00000363016 102 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 Y_RNA.122-201ENST00000363331 96 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC016739.1-201ENST00000405359 345 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AL391361.1-201ENST00000405580 489 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 SDHDP6-201ENST00000414693 480 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 SSXP9-201ENST00000417503 292 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AF186996.5-201ENST00000418098 904 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AL451062.2-201ENST00000427515 271 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 BX276092.6-201ENST00000430476 250 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC126120.1-201ENST00000431082 470 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 BX276092.8-201ENST00000455722 250 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 RN7SKP210-201ENST00000459176 261 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AL136038.1-201ENST00000497246 351 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AL359273.1-201ENST00000510918 627 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 ATP5LP3-201ENST00000514223 304 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 RNA5SP362-201ENST00000516048 118 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 SCARNA24.2-201ENST00000516968 130 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 HIGD1AP5-201ENST00000529959 259 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC022404.1-201ENST00000555320 273 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC006077.1-201ENST00000604746 343 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 RMST_4.1-201ENST00000616886 107 ntBASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC114947.2-201ENST00000565748 2125 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 RLIMP1-201ENST00000339626 1680 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 RNU6-263P-201ENST00000363811 107 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 MIR1178-201ENST00000408396 91 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AL662874.1-201ENST00000426065 230 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 RPL26P6-201ENST00000440913 438 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 HMGN1P11-201ENST00000508668 303 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 SNORA70.20-201ENST00000516848 126 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 SYF2P1-201ENST00000550658 413 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC010547.6-201ENST00000571789 193 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 MIR4512-201ENST00000583257 77 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC008814.1-201ENST00000603797 406 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC009314.1-201ENST00000603871 304 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC034102.8-201ENST00000615146 484 ntBASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.32□□□□□ -1.56
HRH3Q9Y5N1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 MFSD8-239ENST00000641590 2479 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 RNU6-1081P-201ENST00000384537 107 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AL033519.2-201ENST00000403958 392 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AL133482.1-201ENST00000415988 498 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 RPS26P47-201ENST00000427219 348 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 TOMM20P4-201ENST00000427861 435 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 KNOP1P3-201ENST00000446933 426 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 RN7SL629P-201ENST00000489622 285 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 MIR2355-201ENST00000517199 87 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AC027308.1-201ENST00000517993 110 ntBASIC5.31□□□□□ -1.56
HRH3Q9Y5N1 AC087441.2-201ENST00000529141 262 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms