Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC073587.1-201ENST00000447093 876 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AP006222.1-205ENST00000450734 457 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RPL9P9-202ENST00000466501 579 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RN7SL741P-201ENST00000482473 289 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-1315P-201ENST00000517187 99 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AC122688.1-201ENST00000541494 223 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AL121603.1-201ENST00000553815 142 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AL355877.2-201ENST00000603670 358 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR375-201ENST00000362103 64 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 Y_RNA.26-201ENST00000362539 101 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 RNA5SP326-201ENST00000363209 110 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 Y_RNA.183-201ENST00000363882 113 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-395P-201ENST00000365662 106 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 SNORA70.6-201ENST00000383934 134 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-356P-201ENST00000384140 107 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-611P-201ENST00000384276 104 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 SNORA36C-201ENST00000384289 132 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 Y_RNA.518-201ENST00000384552 113 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 Y_RNA.533-201ENST00000384596 114 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR323B-201ENST00000385269 82 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR548H3-201ENST00000408771 118 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AL096701.2-201ENST00000416920 238 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 EIF4EP2-201ENST00000422816 654 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AL592045.1-201ENST00000429867 352 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AC093414.1-201ENST00000434712 514 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 HSPD1P21-201ENST00000436541 245 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 U8.21-201ENST00000459536 136 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 RN7SL188P-201ENST00000469842 285 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 HMGN2P13-201ENST00000476476 274 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 Y_RNA.700-201ENST00000516806 100 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 RNA5SP230-201ENST00000517039 122 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 IGBP1P1-201ENST00000554337 1009 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
PCDHGA11Q9Y5H2 SDAD1P2-201ENST00000441308 2028 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AL009179.1-201ENST00000406085 265 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 DPPA2P3-201ENST00000411853 655 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AL590135.1-201ENST00000422215 156 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 MTATP6P4-201ENST00000427725 675 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 RPL26P6-201ENST00000440913 438 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 GZMAP1-201ENST00000503054 631 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 HMGB3P17-201ENST00000504195 649 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 IGLV3-24-201ENST00000517477 197 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC034114.1-201ENST00000520293 285 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms