Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 OSTCP8-201ENST00000445117 448 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 FABP5P13-201ENST00000452144 328 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 RPS27P26-201ENST00000494583 239 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 NDUFB4P2-201ENST00000509515 391 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC096745.1-201ENST00000509945 370 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 GLYCAM1-201ENST00000546596 285 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC090666.1-201ENST00000578241 445 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 OR4K8P-201ENST00000578842 1048 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC124283.4-201ENST00000581815 456 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
AP4S1Q9Y587 UBE2L4-201ENST00000587688 464 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AC068944.2-201ENST00000610373 403 ntBASIC1.59□□□□□ -2.15
AP4S1Q9Y587 AL359893.1-201ENST00000447628 1580 ntBASIC1.59□□□□□ -2.16
AP4S1Q9Y587 AC123912.3-201ENST00000600907 1367 ntBASIC1.59□□□□□ -2.16
AP4S1Q9Y587 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 MIR1294-201ENST00000408503 142 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC009237.2-201ENST00000421358 284 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 RNF19BPX-201ENST00000426224 625 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 MED6P1-201ENST00000439659 713 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC096638.1-201ENST00000444678 216 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AL360221.1-201ENST00000445989 335 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 HSPE1P6-201ENST00000479457 291 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC105252.1-201ENST00000503089 286 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 RNU7-193P-201ENST00000516723 65 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC023824.2-201ENST00000566185 400 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 MIR3162-201ENST00000581818 82 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AC239803.2-201ENST00000610161 430 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 AL355810.1-201ENST00000614629 552 ntBASIC1.58□□□□□ -2.16
AP4S1Q9Y587 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.58□□□□□ -2.16
AP4S1Q9Y587 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 RNU6-263P-201ENST00000363811 107 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 SNORA38-201ENST00000363946 132 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 U3.20-201ENST00000390909 217 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC003989.2-201ENST00000440224 169 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AL627224.1-201ENST00000448334 444 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC092155.2-201ENST00000454675 477 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 HMGN1P8-201ENST00000463578 288 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC104685.1-201ENST00000502445 371 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 SNORA31.8-201ENST00000516327 108 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 XIAPP1-201ENST00000603162 600 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC013444.2-201ENST00000603317 787 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC107214.2-201ENST00000608204 634 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 OR10AB1P-201ENST00000609613 938 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AP001486.3-201ENST00000615334 372 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC109809.1-201ENST00000619665 545 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 UCA1.1-201ENST00000620952 75 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 AC008669.1-201ENST00000565823 2178 ntBASIC1.57□□□□□ -2.16
AP4S1Q9Y587 HSPA8P4-201ENST00000511877 1920 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 SNORA70.4-201ENST00000365509 134 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AL135786.1-201ENST00000415892 214 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AL831737.1-201ENST00000441288 271 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 OR10R1P-201ENST00000441524 1141 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 ANKRD26P4-201ENST00000455755 950 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 RPL38P4-201ENST00000502376 214 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AC022634.1-201ENST00000520765 532 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AC139103.1-201ENST00000534696 1030 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AC011477.1-204ENST00000623416 1325 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 AC046144.1-201ENST00000478559 1853 ntBASIC1.56□□□□□ -2.16
AP4S1Q9Y587 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP4S1Q9Y587 AL137003.2-201ENST00000606924 2538 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 MIR208A-201ENST00000362287 71 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 SNORA68.1-201ENST00000364537 132 ntBASIC1.55□□□□□ -2.16
AP4S1Q9Y587 RNU4-42P-201ENST00000364738 142 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms