Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AC114801.2-201ENST00000503825 781 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 RN7SKP288-201ENST00000516227 268 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 RN7SKP277-201ENST00000516895 283 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 Y_RNA.715-201ENST00000517082 110 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC091042.1-201ENST00000579213 173 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC015967.1-201ENST00000619893 476 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC004076.2-201ENST00000620532 3323 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RNA5SP515-201ENST00000364570 118 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-596P-201ENST00000365395 98 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-190P-201ENST00000384154 102 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 Y_RNA.480-201ENST00000384364 102 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-45P-201ENST00000384471 107 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 SNORA37-201ENST00000384504 129 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-821P-201ENST00000390995 107 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RNA5SP44-201ENST00000410446 133 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 NEFMP1-201ENST00000443423 1006 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 OR1H1P-201ENST00000448731 937 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RPL9P32-201ENST00000464118 620 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC011005.2-201ENST00000487324 359 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-677P-201ENST00000516914 101 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RN7SKP60-201ENST00000516985 239 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC126615.2-201ENST00000553003 515 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 HMGB3P26-201ENST00000560051 582 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC012119.1-201ENST00000603184 222 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC006363.1-201ENST00000603806 463 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 NANOGP3-201ENST00000605855 286 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 AC233263.6-201ENST00000631132 1963 ntBASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.54□□□□□ -1.52
HCN4Q9Y3Q4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 IRF5P1-201ENST00000504852 2164 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 AC010615.1-201ENST00000594254 1764 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RNA5SP453-201ENST00000362503 119 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-989P-201ENST00000362756 107 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-14P-201ENST00000384630 106 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RNA5SP171-201ENST00000391071 115 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RPL7P2-201ENST00000427639 268 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RNU7-138P-201ENST00000459479 64 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RPL37P6-201ENST00000460682 294 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 Y_RNA.680-201ENST00000516441 93 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 RN7SKP92-201ENST00000517266 244 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 OR5D17P-201ENST00000531492 978 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 AC067852.3-201ENST00000589177 561 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 IGHV3-29-201ENST00000604817 344 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 MIR4272-201ENST00000635924 64 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCN4Q9Y3Q4 AL731566.1-201ENST00000620490 1937 ntBASIC5.52□□□□□ -1.53
HCN4Q9Y3Q4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HCN4Q9Y3Q4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HCN4Q9Y3Q4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HCN4Q9Y3Q4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms