Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SNORD88.1-201ENST00000408684 91 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AL451062.2-201ENST00000427515 271 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AL513043.1-201ENST00000439124 535 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AL671855.1-201ENST00000446875 1203 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 WASF1P1-201ENST00000447560 1131 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AL135752.1-201ENST00000479477 471 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 RPS15AP34-201ENST00000487776 387 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 SNORA31.18-201ENST00000517043 134 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 RPL23AP84-201ENST00000571193 464 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC090615.1-201ENST00000577519 154 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AC096577.2-201ENST00000611455 153 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 MIR8057-201ENST00000620957 69 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AL159972.1-201ENST00000625150 448 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 MIR3651-201ENST00000630427 90 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AL137003.2-201ENST00000606924 2538 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 MAPK10-266ENST00000641066 6555 ntBASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RHBDD3Q9Y3P4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 MTCO1P9-201ENST00000505577 1534 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 SNORD46.1-201ENST00000364139 104 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 SNORA48.5-201ENST00000391143 135 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 SNRPEP2-201ENST00000397592 279 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL512633.1-201ENST00000399931 655 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL138885.1-201ENST00000405921 675 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL024507.1-201ENST00000412741 274 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC099548.1-201ENST00000421443 426 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC018630.2-202ENST00000422992 927 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC005297.2-201ENST00000450430 606 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC114981.1-201ENST00000503897 678 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC026801.2-201ENST00000515352 425 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 RNU6-334P-201ENST00000517072 102 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 SNORA31.22-201ENST00000517204 135 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 GLYCAM1-201ENST00000546596 285 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC107016.2-201ENST00000547968 190 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL355836.1-201ENST00000555951 870 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 H3F3AP1-201ENST00000559984 334 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC068135.2-201ENST00000569293 1028 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 OR1M4P-201ENST00000589199 287 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL390838.2-201ENST00000602394 274 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 RPL12P50-201ENST00000603116 116 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL161729.4-201ENST00000604650 476 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC093838.1-201ENST00000613014 469 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC005332.6-201ENST00000613178 446 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 ATP5A1P2-202ENST00000616464 443 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 MIR1322-201ENST00000638013 71 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AC000403.1-201ENST00000613696 3585 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 AL512283.1-201ENST00000606756 1384 ntBASIC2.48□□□□□ -2.01
RHBDD3Q9Y3P4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 RNU6-461P-201ENST00000364195 107 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 MIR512-1-201ENST00000384913 84 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AL096701.2-201ENST00000416920 238 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 MTCO2P5-201ENST00000422621 426 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 SDCBPP1-201ENST00000440192 890 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 PIGFP3-201ENST00000441918 722 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AC112653.1-201ENST00000443851 386 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AC112492.1-201ENST00000449607 712 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AC003982.1-202ENST00000469928 248 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 COL6A4P2-205ENST00000509855 506 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 RNA5SP341-201ENST00000516261 117 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 RN7SKP57-201ENST00000517248 293 ntBASIC2.47□□□□□ -2.01
RHBDD3Q9Y3P4 AC109329.2-201ENST00000519658 482 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms